RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
HLA-DPB1-216ENST00000488575 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
HLA-DPB1-216ENST00000488575 K7ERS5 55 aa4.93□□□□□ -1.62
HLA-DPB1-216ENST00000488575 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
HLA-DPB1-216ENST00000488575 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
HLA-DPB1-216ENST00000488575 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
HLA-DPB1-216ENST00000488575 A0A0D9SG42 100 aa4.86□□□□□ -1.63
HLA-DPB1-216ENST00000488575 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
HLA-DPB1-216ENST00000488575 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
HLA-DPB1-216ENST00000488575 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
HLA-DPB1-216ENST00000488575 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
HLA-DPB1-216ENST00000488575 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
HLA-DPB1-216ENST00000488575 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
HLA-DPB1-216ENST00000488575 SVIPQ8NHG7 77 aa4.74□□□□□ -1.65
HLA-DPB1-216ENST00000488575 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
HLA-DPB1-216ENST00000488575 MT1EP04732 61 aa4.69□□□□□ -1.66
HLA-DPB1-216ENST00000488575 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
HLA-DPB1-216ENST00000488575 ROMO1P60602 79 aa4.68□□□□□ -1.66
HLA-DPB1-216ENST00000488575 CAMK2N1Q7Z7J9 78 aa4.63□□□□□ -1.67
HLA-DPB1-216ENST00000488575 MT1GP13640 62 aa4.61□□□□□ -1.67
HLA-DPB1-216ENST00000488575 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
HLA-DPB1-216ENST00000488575 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
HLA-DPB1-216ENST00000488575 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
HLA-DPB1-216ENST00000488575 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
HLA-DPB1-216ENST00000488575 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
HLA-DPB1-216ENST00000488575 MT1MQ8N339 61 aa4.51□□□□□ -1.69
HLA-DPB1-216ENST00000488575 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
HLA-DPB1-216ENST00000488575 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
HLA-DPB1-216ENST00000488575 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
HLA-DPB1-216ENST00000488575 TNP1P09430 55 aa4.45□□□□□ -1.7
HLA-DPB1-216ENST00000488575 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
HLA-DPB1-216ENST00000488575 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
HLA-DPB1-216ENST00000488575 MT1LQ93083 61 aa4.34□□□□□ -1.71
HLA-DPB1-216ENST00000488575 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
HLA-DPB1-216ENST00000488575 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
HLA-DPB1-216ENST00000488575 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
HLA-DPB1-216ENST00000488575 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
HLA-DPB1-216ENST00000488575 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
HLA-DPB1-216ENST00000488575 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
HLA-DPB1-216ENST00000488575 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
HLA-DPB1-216ENST00000488575 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
HLA-DPB1-216ENST00000488575 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
HLA-DPB1-216ENST00000488575 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
HLA-DPB1-216ENST00000488575 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
HLA-DPB1-216ENST00000488575 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
HLA-DPB1-216ENST00000488575 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
HLA-DPB1-216ENST00000488575 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
HLA-DPB1-216ENST00000488575 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
HLA-DPB1-216ENST00000488575 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
HLA-DPB1-216ENST00000488575 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
HLA-DPB1-216ENST00000488575 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
HLA-DPB1-216ENST00000488575 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
HLA-DPB1-216ENST00000488575 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
HLA-DPB1-216ENST00000488575 MT1AP04731 61 aa3.69□□□□□ -1.82
HLA-DPB1-216ENST00000488575 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
HLA-DPB1-216ENST00000488575 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
HLA-DPB1-216ENST00000488575 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
HLA-DPB1-216ENST00000488575 MT3P25713 68 aa3.4□□□□□ -1.87
HLA-DPB1-216ENST00000488575 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
HLA-DPB1-216ENST00000488575 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
HLA-DPB1-216ENST00000488575 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
HLA-DPB1-216ENST00000488575 H3BS24 57 aa3.2□□□□□ -1.9
HLA-DPB1-216ENST00000488575 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
HLA-DPB1-216ENST00000488575 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
HLA-DPB1-216ENST00000488575 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
HLA-DPB1-216ENST00000488575 INE1O15225 51 aa3.09□□□□□ -1.91
HLA-DPB1-216ENST00000488575 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
HLA-DPB1-216ENST00000488575 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
HLA-DPB1-216ENST00000488575 LCE1FQ5T754 118 aa3□□□□□ -1.93
HLA-DPB1-216ENST00000488575 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
HLA-DPB1-216ENST00000488575 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
HLA-DPB1-216ENST00000488575 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
HLA-DPB1-216ENST00000488575 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
HLA-DPB1-216ENST00000488575 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
HLA-DPB1-216ENST00000488575 PRM1P04553 51 aa2.4□□□□□ -2.03
HLA-DPB1-216ENST00000488575 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
HLA-DPB1-216ENST00000488575 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
HLA-DPB1-216ENST00000488575 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 59.4 ms