RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 A0A0D9SG42 100 aa4.94□□□□□ -1.62
TTC3-221ENST00000488522 Q1T7F1 81 aa4.94□□□□□ -1.62
TTC3-221ENST00000488522 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
TTC3-221ENST00000488522 UQCR11O14957 56 aa4.89□□□□□ -1.63
TTC3-221ENST00000488522 PSPHP1O15172 72 aa4.89□□□□□ -1.63
TTC3-221ENST00000488522 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
TTC3-221ENST00000488522 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
TTC3-221ENST00000488522 A8MU10 97 aa4.86□□□□□ -1.63
TTC3-221ENST00000488522 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
TTC3-221ENST00000488522 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
TTC3-221ENST00000488522 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
TTC3-221ENST00000488522 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
TTC3-221ENST00000488522 A6NED7 52 aa4.76□□□□□ -1.65
TTC3-221ENST00000488522 K7ERS5 55 aa4.68□□□□□ -1.66
TTC3-221ENST00000488522 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
TTC3-221ENST00000488522 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
TTC3-221ENST00000488522 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
TTC3-221ENST00000488522 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
TTC3-221ENST00000488522 MT1EP04732 61 aa4.6□□□□□ -1.67
TTC3-221ENST00000488522 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
TTC3-221ENST00000488522 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
TTC3-221ENST00000488522 TNP1P09430 55 aa4.54□□□□□ -1.68
TTC3-221ENST00000488522 MT1GP13640 62 aa4.48□□□□□ -1.69
TTC3-221ENST00000488522 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
TTC3-221ENST00000488522 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
TTC3-221ENST00000488522 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
TTC3-221ENST00000488522 MT4P47944 62 aa4.43□□□□□ -1.7
TTC3-221ENST00000488522 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
TTC3-221ENST00000488522 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
TTC3-221ENST00000488522 ROMO1P60602 79 aa4.4□□□□□ -1.71
TTC3-221ENST00000488522 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
TTC3-221ENST00000488522 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
TTC3-221ENST00000488522 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
TTC3-221ENST00000488522 MT1MQ8N339 61 aa4.39□□□□□ -1.71
TTC3-221ENST00000488522 MT1LQ93083 61 aa4.34□□□□□ -1.71
TTC3-221ENST00000488522 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
TTC3-221ENST00000488522 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
TTC3-221ENST00000488522 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
TTC3-221ENST00000488522 MT3P25713 68 aa4.19□□□□□ -1.74
TTC3-221ENST00000488522 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
TTC3-221ENST00000488522 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
TTC3-221ENST00000488522 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
TTC3-221ENST00000488522 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
TTC3-221ENST00000488522 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
TTC3-221ENST00000488522 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
TTC3-221ENST00000488522 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
TTC3-221ENST00000488522 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
TTC3-221ENST00000488522 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
TTC3-221ENST00000488522 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
TTC3-221ENST00000488522 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
TTC3-221ENST00000488522 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
TTC3-221ENST00000488522 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
TTC3-221ENST00000488522 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
TTC3-221ENST00000488522 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
TTC3-221ENST00000488522 MUC5ACP98088 5654 aa3.84□□□□□ -1.8
TTC3-221ENST00000488522 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
TTC3-221ENST00000488522 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
TTC3-221ENST00000488522 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
TTC3-221ENST00000488522 MT1AP04731 61 aa3.7□□□□□ -1.82
TTC3-221ENST00000488522 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
TTC3-221ENST00000488522 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
TTC3-221ENST00000488522 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
TTC3-221ENST00000488522 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
TTC3-221ENST00000488522 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
TTC3-221ENST00000488522 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
TTC3-221ENST00000488522 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
TTC3-221ENST00000488522 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
TTC3-221ENST00000488522 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
TTC3-221ENST00000488522 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
TTC3-221ENST00000488522 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
TTC3-221ENST00000488522 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
TTC3-221ENST00000488522 PHGR1C9JFL3 82 aa2.56□□□□□ -2
TTC3-221ENST00000488522 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
TTC3-221ENST00000488522 INE1O15225 51 aa2.44□□□□□ -2.02
TTC3-221ENST00000488522 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.05
TTC3-221ENST00000488522 PRM1P04553 51 aa2.27□□□□□ -2.05
TTC3-221ENST00000488522 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
TTC3-221ENST00000488522 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 58.8 ms