RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 S100ZQ8WXG8 99 aa0.42□□□□□ -2.34
ITGB1-214ENST00000488427 CHCHD1Q96BP2 118 aaKnown RBP0.41□□□□□ -2.34
ITGB1-214ENST00000488427 KANTRA0A1W2PQU2 76 aa0.4□□□□□ -2.35
ITGB1-214ENST00000488427 UQCRQO14949 82 aa0.4□□□□□ -2.35
ITGB1-214ENST00000488427 RPS28P62857 69 aaKnown RBP0.4□□□□□ -2.35
ITGB1-214ENST00000488427 BVES-AS1Q5T3Y7 98 aa0.4□□□□□ -2.35
ITGB1-214ENST00000488427 BRK1Q8WUW1 75 aa0.4□□□□□ -2.35
ITGB1-214ENST00000488427 IFI27L1Q96BM0 104 aa0.4□□□□□ -2.35
ITGB1-214ENST00000488427 JMJD7-PLA2G4BH0Y9G9 81 aa0.39□□□□□ -2.35
ITGB1-214ENST00000488427 ACYP1P07311 99 aa0.39□□□□□ -2.35
ITGB1-214ENST00000488427 TNP1P09430 55 aa0.39□□□□□ -2.35
ITGB1-214ENST00000488427 S100PP25815 95 aa0.39□□□□□ -2.35
ITGB1-214ENST00000488427 SPATA45Q537H7 98 aa0.39□□□□□ -2.35
ITGB1-214ENST00000488427 ATOH7Q8N100 152 aa0.39□□□□□ -2.35
ITGB1-214ENST00000488427 C9JAW5 83 aa0.38□□□□□ -2.35
ITGB1-214ENST00000488427 J3QR89 54 aa0.37□□□□□ -2.35
ITGB1-214ENST00000488427 LOC105371267A0A1B0GV96 52 aa0.36□□□□□ -2.35
ITGB1-214ENST00000488427 CCDC179H3BU77 68 aa0.36□□□□□ -2.35
ITGB1-214ENST00000488427 MT-ND4LP03901 98 aa0.36□□□□□ -2.35
ITGB1-214ENST00000488427 MIR22HGQ0VDD5 57 aa0.36□□□□□ -2.35
ITGB1-214ENST00000488427 DMAC1Q96GE9 116 aa0.36□□□□□ -2.35
ITGB1-214ENST00000488427 K7ERU9 68 aa0.35□□□□□ -2.35
ITGB1-214ENST00000488427 IGKCP01834 107 aa0.35□□□□□ -2.35
ITGB1-214ENST00000488427 CLLU1Q5K131 121 aa0.35□□□□□ -2.35
ITGB1-214ENST00000488427 CYP4F30PQ9H0H9 118 aa0.35□□□□□ -2.35
ITGB1-214ENST00000488427 LINC01545Q5VT33 79 aa0.34□□□□□ -2.36
ITGB1-214ENST00000488427 SEC11CQ9BY50 192 aa0.34□□□□□ -2.36
ITGB1-214ENST00000488427 H0YGX0 51 aa0.33□□□□□ -2.36
ITGB1-214ENST00000488427 C18orf32Q8TCD1 76 aa0.33□□□□□ -2.36
ITGB1-214ENST00000488427 PMCHL2Q9BQD1 86 aa0.33□□□□□ -2.36
ITGB1-214ENST00000488427 HIGD1BQ9P298 99 aa0.32□□□□□ -2.36
ITGB1-214ENST00000488427 TRAV22A0A0B4J277 110 aa0.31□□□□□ -2.36
ITGB1-214ENST00000488427 ATP5EP56381 51 aaPredicted RBP0.31□□□□□ -2.36
ITGB1-214ENST00000488427 LOC101927531A0A1B0GV80 90 aa0.3□□□□□ -2.36
ITGB1-214ENST00000488427 NREPQ16612 68 aa0.3□□□□□ -2.36
ITGB1-214ENST00000488427 SERP1Q9Y6X1 66 aa0.3□□□□□ -2.36
ITGB1-214ENST00000488427 A0A1B0GV90 55 aa0.29□□□□□ -2.36
ITGB1-214ENST00000488427 DLEU1O43261 78 aa0.29□□□□□ -2.36
ITGB1-214ENST00000488427 LEPROTL1O95214 131 aa0.29□□□□□ -2.36
ITGB1-214ENST00000488427 SMIM6P0DI80 62 aa0.29□□□□□ -2.36
ITGB1-214ENST00000488427 PRR15LQ9BU68 103 aa0.29□□□□□ -2.36
ITGB1-214ENST00000488427 LINC00208Q96KT6 92 aa0.28□□□□□ -2.36
ITGB1-214ENST00000488427 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.36
ITGB1-214ENST00000488427 ACYP2P14621 99 aa0.27□□□□□ -2.37
ITGB1-214ENST00000488427 SVBPQ8N300 66 aa0.27□□□□□ -2.37
ITGB1-214ENST00000488427 SPTSSBQ8NFR3 76 aa0.27□□□□□ -2.37
ITGB1-214ENST00000488427 PEA15Q15121 130 aa0.26□□□□□ -2.37
ITGB1-214ENST00000488427 GTF2H5Q6ZYL4 71 aa0.26□□□□□ -2.37
ITGB1-214ENST00000488427 UQCR10Q9UDW1 63 aa0.26□□□□□ -2.37
ITGB1-214ENST00000488427 APOC3P02656 99 aa0.25□□□□□ -2.37
ITGB1-214ENST00000488427 S100A1P23297 94 aa0.25□□□□□ -2.37
ITGB1-214ENST00000488427 UQCR11O14957 56 aa0.24□□□□□ -2.37
ITGB1-214ENST00000488427 COX6CP09669 75 aa0.24□□□□□ -2.37
ITGB1-214ENST00000488427 KRTDAPP60985 99 aa0.24□□□□□ -2.37
ITGB1-214ENST00000488427 PRO1854Q9UHT4 67 aa0.23□□□□□ -2.37
ITGB1-214ENST00000488427 TMEM218A2RU14 115 aa0.22□□□□□ -2.37
ITGB1-214ENST00000488427 HSD52Q0P140 79 aa0.22□□□□□ -2.37
ITGB1-214ENST00000488427 C14orf144Q96I85 54 aa0.22□□□□□ -2.37
ITGB1-214ENST00000488427 SPCS1Q9Y6A9 102 aa0.22□□□□□ -2.37
ITGB1-214ENST00000488427 CHKB-CPT1BH3BT56 60 aa0.21□□□□□ -2.38
ITGB1-214ENST00000488427 ATOX1O00244 68 aa0.21□□□□□ -2.38
ITGB1-214ENST00000488427 LINC01558Q9Y6Z2 57 aa0.2□□□□□ -2.38
ITGB1-214ENST00000488427 SYS1-DBNDD2H3BUS1 97 aa0.19□□□□□ -2.38
ITGB1-214ENST00000488427 VAMP8Q9BV40 100 aa0.19□□□□□ -2.38
ITGB1-214ENST00000488427 H7BZZ5 65 aa0.18□□□□□ -2.38
ITGB1-214ENST00000488427 M0R143 59 aa0.18□□□□□ -2.38
ITGB1-214ENST00000488427 COL5A1-AS1Q5SY13 56 aa0.18□□□□□ -2.38
ITGB1-214ENST00000488427 SERP2Q8N6R1 65 aa0.18□□□□□ -2.38
ITGB1-214ENST00000488427 H0Y9P7 68 aa0.17□□□□□ -2.38
ITGB1-214ENST00000488427 ETDBQ3ZM63 59 aa0.17□□□□□ -2.38
ITGB1-214ENST00000488427 A0A1B0GU69 56 aa0.15□□□□□ -2.39
ITGB1-214ENST00000488427 COX8AP10176 69 aa0.15□□□□□ -2.39
ITGB1-214ENST00000488427 ATP5EP2Q5VTU8 51 aa0.11□□□□□ -2.39
ITGB1-214ENST00000488427 PYY3Q5JQD4 70 aa0.1□□□□□ -2.39
ITGB1-214ENST00000488427 LINC00643Q86TS7 51 aa0.1□□□□□ -2.39
ITGB1-214ENST00000488427 ATXN8Q156A1 80 aa0.07□□□□□ -2.4
ITGB1-214ENST00000488427 PRM1P04553 51 aa0.05□□□□□ -2.4
ITGB1-214ENST00000488427 UBL5Q9BZL1 73 aa0.05□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 243.1 ms