RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 KRTAP2-2Q9BYT5 123 aa8.07□□□□□ -1.12
TRIM8-204ENST00000487927 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
TRIM8-204ENST00000487927 SPRR2DP22532 72 aa8.06□□□□□ -1.12
TRIM8-204ENST00000487927 TNP1P09430 55 aa8.04□□□□□ -1.12
TRIM8-204ENST00000487927 KRTAP23-1A1A580 65 aa7.94□□□□□ -1.14
TRIM8-204ENST00000487927 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
TRIM8-204ENST00000487927 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
TRIM8-204ENST00000487927 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
TRIM8-204ENST00000487927 LCE5AQ5TCM9 118 aa7.58□□□□□ -1.2
TRIM8-204ENST00000487927 MT1EP04732 61 aa7.56□□□□□ -1.2
TRIM8-204ENST00000487927 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
TRIM8-204ENST00000487927 DSTQ03001 7570 aaKnown RBP7.54□□□□□ -1.2
TRIM8-204ENST00000487927 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.21
TRIM8-204ENST00000487927 GPR98Q8WXG9 6306 aa7.4□□□□□ -1.22
TRIM8-204ENST00000487927 KRTAP4-9Q9BYQ8 210 aa7.38□□□□□ -1.23
TRIM8-204ENST00000487927 KRTAP19-5Q3LI72 72 aa7.37□□□□□ -1.23
TRIM8-204ENST00000487927 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
TRIM8-204ENST00000487927 MT1GP13640 62 aa7.3□□□□□ -1.24
TRIM8-204ENST00000487927 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
TRIM8-204ENST00000487927 MT1MQ8N339 61 aa7.21□□□□□ -1.26
TRIM8-204ENST00000487927 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
TRIM8-204ENST00000487927 MT1LQ93083 61 aa7.19□□□□□ -1.26
TRIM8-204ENST00000487927 KRTAP19-4Q3LI73 84 aa7.11□□□□□ -1.27
TRIM8-204ENST00000487927 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
TRIM8-204ENST00000487927 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
TRIM8-204ENST00000487927 MT4P47944 62 aa7.07□□□□□ -1.28
TRIM8-204ENST00000487927 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
TRIM8-204ENST00000487927 KRTAP5-4Q6L8H1 288 aa6.99□□□□□ -1.29
TRIM8-204ENST00000487927 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
TRIM8-204ENST00000487927 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
TRIM8-204ENST00000487927 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
TRIM8-204ENST00000487927 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
TRIM8-204ENST00000487927 LCE3CQ5T5A8 94 aa6.84□□□□□ -1.31
TRIM8-204ENST00000487927 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
TRIM8-204ENST00000487927 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
TRIM8-204ENST00000487927 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.34
TRIM8-204ENST00000487927 KRTAP20-2Q3LI61 65 aa6.6□□□□□ -1.35
TRIM8-204ENST00000487927 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
TRIM8-204ENST00000487927 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
TRIM8-204ENST00000487927 KRTAP5-7Q6L8G8 165 aa6.53□□□□□ -1.36
TRIM8-204ENST00000487927 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
TRIM8-204ENST00000487927 KRTAP12-4P60329 112 aa6.45□□□□□ -1.38
TRIM8-204ENST00000487927 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
TRIM8-204ENST00000487927 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
TRIM8-204ENST00000487927 MT1AP04731 61 aa6.11□□□□□ -1.43
TRIM8-204ENST00000487927 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
TRIM8-204ENST00000487927 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
TRIM8-204ENST00000487927 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
TRIM8-204ENST00000487927 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
TRIM8-204ENST00000487927 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
TRIM8-204ENST00000487927 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
TRIM8-204ENST00000487927 H3BS24 57 aa5.87□□□□□ -1.47
TRIM8-204ENST00000487927 KRTAP6-2Q3LI66 62 aa5.85□□□□□ -1.47
TRIM8-204ENST00000487927 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
TRIM8-204ENST00000487927 AHNAKQ09666 5890 aaKnown RBP5.74□□□□□ -1.49
TRIM8-204ENST00000487927 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
TRIM8-204ENST00000487927 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
TRIM8-204ENST00000487927 INE1O15225 51 aa5.61□□□□□ -1.51
TRIM8-204ENST00000487927 MT3P25713 68 aa5.57□□□□□ -1.52
TRIM8-204ENST00000487927 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
TRIM8-204ENST00000487927 KRTAP5-1Q6L8H4 278 aa5.51□□□□□ -1.53
TRIM8-204ENST00000487927 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
TRIM8-204ENST00000487927 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
TRIM8-204ENST00000487927 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
TRIM8-204ENST00000487927 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
TRIM8-204ENST00000487927 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
TRIM8-204ENST00000487927 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
TRIM8-204ENST00000487927 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
TRIM8-204ENST00000487927 PRM1P04553 51 aa4.37□□□□□ -1.71
TRIM8-204ENST00000487927 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
TRIM8-204ENST00000487927 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
TRIM8-204ENST00000487927 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
TRIM8-204ENST00000487927 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
TRIM8-204ENST00000487927 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
TRIM8-204ENST00000487927 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
TRIM8-204ENST00000487927 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
TRIM8-204ENST00000487927 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
TRIM8-204ENST00000487927 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 87.7 ms