RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 BRK1Q8WUW1 75 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 TTTY10Q9BZA0 68 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 WDFY4Q6ZS81 3184 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 HECTD1Q9ULT8 2610 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 LRRK2Q5S007 2527 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 GCN1Q92616 2671 aaKnown RBP-0.14□□□□□ -2.43
SMC4-219ENST00000487747 SPTBP11277 2137 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 MKI67P46013 3256 aaKnown RBP-0.14□□□□□ -2.43
SMC4-219ENST00000487747 PKD1L1Q8TDX9 2849 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 EP400Q96L91 3159 aa-0.14□□□□□ -2.43
SMC4-219ENST00000487747 SPTA1P02549 2419 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 CEP250Q9BV73 2442 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 CDH23Q9H251 3354 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 SETXQ7Z333 2677 aaKnown RBP-0.15□□□□□ -2.43
SMC4-219ENST00000487747 TACC2O95359 2948 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 EPG5Q9HCE0 2579 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 NIPBLQ6KC79 2804 aaeCLIP-0.15□□□□□ -2.438e-8■■■■■ 47
SMC4-219ENST00000487747 SPTAN1Q13813 2472 aaKnown RBP-0.15□□□□□ -2.43
SMC4-219ENST00000487747 H3BSH0 61 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 HTN1P15515 57 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 ENY2Q9NPA8 101 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 RANBP2P49792 3224 aaKnown RBP-0.15□□□□□ -2.43
SMC4-219ENST00000487747 FLNBO75369 2602 aaKnown RBP-0.15□□□□□ -2.43
SMC4-219ENST00000487747 CHD9Q3L8U1 2897 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 PRRC2CQ9Y520 2896 aaKnown RBP-0.15□□□□□ -2.43
SMC4-219ENST00000487747 MTORP42345 2549 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 UBR5O95071 2799 aaPredicted RBP-0.15□□□□□ -2.43
SMC4-219ENST00000487747 NBEAL2Q6ZNJ1 2754 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 DMXL1Q9Y485 3027 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 ITPR3Q14573 2671 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 C5orf42Q9H799 3197 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 ADGRG4Q8IZF6 3080 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 AKAP13Q12802 2813 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 NINQ8N4C6 2090 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 LOC400499M0QZD8 3231 aa-0.15□□□□□ -2.43
SMC4-219ENST00000487747 FRYQ5TBA9 3013 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 TLN2Q9Y4G6 2542 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 FREM2Q5SZK8 3169 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 TRIOO75962 3097 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 BOD1L1Q8NFC6 3051 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 MXRA5Q9NR99 2828 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 CFAP46Q8IYW2 2715 aa-0.16□□□□□ -2.43
SMC4-219ENST00000487747 UTRNP46939 3433 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 BDP1A6H8Y1 2624 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 TEX15Q9BXT5 2789 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 ZZEF1O43149 2961 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 REV3LO60673 3130 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 CHD6Q8TD26 2715 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 WDR87Q6ZQQ6 2873 aa-0.16□□□□□ -2.44
SMC4-219ENST00000487747 ATRQ13535 2644 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 CEP295Q9C0D2 2601 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 PRUNE2Q8WUY3 3088 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 NF1P21359 2839 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 KALRNO60229 2985 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 CEP350Q5VT06 3117 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 GOLGB1Q14789 3259 aaKnown RBP-0.17□□□□□ -2.44
SMC4-219ENST00000487747 ITPR2Q14571 2701 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 MGAQ8IWI9 3026 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 CEP290O15078 2479 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 HTN3P15516 51 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 ITPR1Q14643 2758 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 DNAH12Q6ZR08 3092 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 NBEAQ8NFP9 2946 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 HTTP42858 3142 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 FRYLO94915 3013 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 LRBAP50851 2863 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 CENPFP49454 3210 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 TRANK1O15050 2925 aa-0.17□□□□□ -2.44
SMC4-219ENST00000487747 CFAP47Q6ZTR5 3102 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 DMXL2Q8TDJ6 3036 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 CFAP54Q96N23 3096 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 CENPEQ02224 2701 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 DCHS2Q6V1P9 2916 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 PIEZO2Q9H5I5 2752 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 VPS13AQ96RL7 3174 aa-0.18□□□□□ -2.44
SMC4-219ENST00000487747 ATMQ13315 3056 aa-0.19□□□□□ -2.44
SMC4-219ENST00000487747 CRYBG3Q68DQ2 2970 aa-0.19□□□□□ -2.44
SMC4-219ENST00000487747 UTP20O75691 2785 aaKnown RBP-0.2□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 14.1 ms