RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 KRTAP19-3Q7Z4W3 81 aa7.1□□□□□ -1.27
SEC22A-208ENST00000487572 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SEC22A-208ENST00000487572 ROMO1P60602 79 aa7.01□□□□□ -1.29
SEC22A-208ENST00000487572 KRTAP12-3P60328 96 aa7□□□□□ -1.29
SEC22A-208ENST00000487572 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
SEC22A-208ENST00000487572 MT1LQ93083 61 aa6.99□□□□□ -1.29
SEC22A-208ENST00000487572 MT1GP13640 62 aa6.97□□□□□ -1.29
SEC22A-208ENST00000487572 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
SEC22A-208ENST00000487572 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
SEC22A-208ENST00000487572 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
SEC22A-208ENST00000487572 MT1MQ8N339 61 aa6.88□□□□□ -1.31
SEC22A-208ENST00000487572 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
SEC22A-208ENST00000487572 PRO0628Q9UI54 55 aa6.82□□□□□ -1.32
SEC22A-208ENST00000487572 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
SEC22A-208ENST00000487572 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
SEC22A-208ENST00000487572 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
SEC22A-208ENST00000487572 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
SEC22A-208ENST00000487572 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
SEC22A-208ENST00000487572 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
SEC22A-208ENST00000487572 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
SEC22A-208ENST00000487572 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
SEC22A-208ENST00000487572 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
SEC22A-208ENST00000487572 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
SEC22A-208ENST00000487572 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
SEC22A-208ENST00000487572 KTN1-AS1Q86SY8 53 aa6.38□□□□□ -1.39
SEC22A-208ENST00000487572 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
SEC22A-208ENST00000487572 MT4P47944 62 aa6.31□□□□□ -1.4
SEC22A-208ENST00000487572 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
SEC22A-208ENST00000487572 KRTAP5-4Q6L8H1 288 aa6.3□□□□□ -1.4
SEC22A-208ENST00000487572 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
SEC22A-208ENST00000487572 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
SEC22A-208ENST00000487572 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
SEC22A-208ENST00000487572 H3BS24 57 aa6.08□□□□□ -1.44
SEC22A-208ENST00000487572 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
SEC22A-208ENST00000487572 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
SEC22A-208ENST00000487572 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
SEC22A-208ENST00000487572 MT1AP04731 61 aa5.95□□□□□ -1.46
SEC22A-208ENST00000487572 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
SEC22A-208ENST00000487572 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
SEC22A-208ENST00000487572 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
SEC22A-208ENST00000487572 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
SEC22A-208ENST00000487572 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
SEC22A-208ENST00000487572 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
SEC22A-208ENST00000487572 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
SEC22A-208ENST00000487572 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
SEC22A-208ENST00000487572 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
SEC22A-208ENST00000487572 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
SEC22A-208ENST00000487572 MT3P25713 68 aa5.42□□□□□ -1.54
SEC22A-208ENST00000487572 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
SEC22A-208ENST00000487572 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
SEC22A-208ENST00000487572 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
SEC22A-208ENST00000487572 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
SEC22A-208ENST00000487572 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
SEC22A-208ENST00000487572 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
SEC22A-208ENST00000487572 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
SEC22A-208ENST00000487572 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
SEC22A-208ENST00000487572 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
SEC22A-208ENST00000487572 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
SEC22A-208ENST00000487572 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
SEC22A-208ENST00000487572 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
SEC22A-208ENST00000487572 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
SEC22A-208ENST00000487572 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
SEC22A-208ENST00000487572 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
SEC22A-208ENST00000487572 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
SEC22A-208ENST00000487572 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
SEC22A-208ENST00000487572 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
SEC22A-208ENST00000487572 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
SEC22A-208ENST00000487572 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
SEC22A-208ENST00000487572 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
SEC22A-208ENST00000487572 INE1O15225 51 aa4.02□□□□□ -1.77
SEC22A-208ENST00000487572 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
SEC22A-208ENST00000487572 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
SEC22A-208ENST00000487572 PRM1P04553 51 aa3.63□□□□□ -1.83
SEC22A-208ENST00000487572 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SEC22A-208ENST00000487572 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
SEC22A-208ENST00000487572 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
SEC22A-208ENST00000487572 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SEC22A-208ENST00000487572 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 663.8 ms