RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
TOP3B-216ENST00000487485 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
TOP3B-216ENST00000487485 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
TOP3B-216ENST00000487485 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
TOP3B-216ENST00000487485 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
TOP3B-216ENST00000487485 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
TOP3B-216ENST00000487485 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
TOP3B-216ENST00000487485 ROMO1P60602 79 aa3.94□□□□□ -1.78
TOP3B-216ENST00000487485 MT1EP04732 61 aa3.93□□□□□ -1.78
TOP3B-216ENST00000487485 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
TOP3B-216ENST00000487485 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
TOP3B-216ENST00000487485 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
TOP3B-216ENST00000487485 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
TOP3B-216ENST00000487485 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
TOP3B-216ENST00000487485 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
TOP3B-216ENST00000487485 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
TOP3B-216ENST00000487485 MT4P47944 62 aa3.81□□□□□ -1.8
TOP3B-216ENST00000487485 MT1GP13640 62 aa3.8□□□□□ -1.8
TOP3B-216ENST00000487485 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
TOP3B-216ENST00000487485 MT1LQ93083 61 aa3.8□□□□□ -1.8
TOP3B-216ENST00000487485 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
TOP3B-216ENST00000487485 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
TOP3B-216ENST00000487485 MT1MQ8N339 61 aa3.73□□□□□ -1.81
TOP3B-216ENST00000487485 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
TOP3B-216ENST00000487485 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
TOP3B-216ENST00000487485 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
TOP3B-216ENST00000487485 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
TOP3B-216ENST00000487485 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
TOP3B-216ENST00000487485 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
TOP3B-216ENST00000487485 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
TOP3B-216ENST00000487485 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
TOP3B-216ENST00000487485 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
TOP3B-216ENST00000487485 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
TOP3B-216ENST00000487485 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
TOP3B-216ENST00000487485 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
TOP3B-216ENST00000487485 SVIPQ8NHG7 77 aa3.49□□□□□ -1.85
TOP3B-216ENST00000487485 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
TOP3B-216ENST00000487485 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
TOP3B-216ENST00000487485 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
TOP3B-216ENST00000487485 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
TOP3B-216ENST00000487485 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
TOP3B-216ENST00000487485 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
TOP3B-216ENST00000487485 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
TOP3B-216ENST00000487485 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
TOP3B-216ENST00000487485 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
TOP3B-216ENST00000487485 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
TOP3B-216ENST00000487485 MT1AP04731 61 aa3.24□□□□□ -1.89
TOP3B-216ENST00000487485 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
TOP3B-216ENST00000487485 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
TOP3B-216ENST00000487485 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
TOP3B-216ENST00000487485 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
TOP3B-216ENST00000487485 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
TOP3B-216ENST00000487485 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
TOP3B-216ENST00000487485 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
TOP3B-216ENST00000487485 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
TOP3B-216ENST00000487485 MT3P25713 68 aa2.96□□□□□ -1.94
TOP3B-216ENST00000487485 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
TOP3B-216ENST00000487485 H3BS24 57 aa2.8□□□□□ -1.96
TOP3B-216ENST00000487485 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
TOP3B-216ENST00000487485 A0A0A0MQY5 61 aa2.65□□□□□ -1.99
TOP3B-216ENST00000487485 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
TOP3B-216ENST00000487485 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
TOP3B-216ENST00000487485 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
TOP3B-216ENST00000487485 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
TOP3B-216ENST00000487485 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
TOP3B-216ENST00000487485 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TOP3B-216ENST00000487485 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
TOP3B-216ENST00000487485 INE1O15225 51 aa2.32□□□□□ -2.04
TOP3B-216ENST00000487485 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
TOP3B-216ENST00000487485 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
TOP3B-216ENST00000487485 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
TOP3B-216ENST00000487485 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
TOP3B-216ENST00000487485 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
TOP3B-216ENST00000487485 PRM1P04553 51 aa2.03□□□□□ -2.08
TOP3B-216ENST00000487485 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
TOP3B-216ENST00000487485 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
TOP3B-216ENST00000487485 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
TOP3B-216ENST00000487485 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 137.2 ms