RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
CLIP2-207ENST00000487447 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
CLIP2-207ENST00000487447 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
CLIP2-207ENST00000487447 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
CLIP2-207ENST00000487447 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
CLIP2-207ENST00000487447 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
CLIP2-207ENST00000487447 MT1GP13640 62 aa4.18□□□□□ -1.74
CLIP2-207ENST00000487447 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
CLIP2-207ENST00000487447 MT1LQ93083 61 aa4.17□□□□□ -1.74
CLIP2-207ENST00000487447 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
CLIP2-207ENST00000487447 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
CLIP2-207ENST00000487447 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
CLIP2-207ENST00000487447 MT1MQ8N339 61 aa4.11□□□□□ -1.75
CLIP2-207ENST00000487447 ROMO1P60602 79 aa4.07□□□□□ -1.76
CLIP2-207ENST00000487447 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CLIP2-207ENST00000487447 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
CLIP2-207ENST00000487447 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CLIP2-207ENST00000487447 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
CLIP2-207ENST00000487447 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CLIP2-207ENST00000487447 MT4P47944 62 aa3.96□□□□□ -1.78
CLIP2-207ENST00000487447 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
CLIP2-207ENST00000487447 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
CLIP2-207ENST00000487447 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
CLIP2-207ENST00000487447 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
CLIP2-207ENST00000487447 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
CLIP2-207ENST00000487447 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
CLIP2-207ENST00000487447 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
CLIP2-207ENST00000487447 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
CLIP2-207ENST00000487447 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
CLIP2-207ENST00000487447 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CLIP2-207ENST00000487447 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
CLIP2-207ENST00000487447 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
CLIP2-207ENST00000487447 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
CLIP2-207ENST00000487447 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
CLIP2-207ENST00000487447 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
CLIP2-207ENST00000487447 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
CLIP2-207ENST00000487447 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
CLIP2-207ENST00000487447 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
CLIP2-207ENST00000487447 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
CLIP2-207ENST00000487447 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
CLIP2-207ENST00000487447 MT1AP04731 61 aa3.56□□□□□ -1.84
CLIP2-207ENST00000487447 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
CLIP2-207ENST00000487447 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CLIP2-207ENST00000487447 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
CLIP2-207ENST00000487447 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CLIP2-207ENST00000487447 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CLIP2-207ENST00000487447 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
CLIP2-207ENST00000487447 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
CLIP2-207ENST00000487447 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
CLIP2-207ENST00000487447 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
CLIP2-207ENST00000487447 SVIPQ8NHG7 77 aa3.29□□□□□ -1.88
CLIP2-207ENST00000487447 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
CLIP2-207ENST00000487447 MT3P25713 68 aa3.23□□□□□ -1.89
CLIP2-207ENST00000487447 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
CLIP2-207ENST00000487447 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CLIP2-207ENST00000487447 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
CLIP2-207ENST00000487447 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CLIP2-207ENST00000487447 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
CLIP2-207ENST00000487447 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CLIP2-207ENST00000487447 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
CLIP2-207ENST00000487447 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
CLIP2-207ENST00000487447 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CLIP2-207ENST00000487447 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CLIP2-207ENST00000487447 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
CLIP2-207ENST00000487447 NDUFAF8A1L188 74 aa2.57□□□□□ -2
CLIP2-207ENST00000487447 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
CLIP2-207ENST00000487447 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
CLIP2-207ENST00000487447 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
CLIP2-207ENST00000487447 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CLIP2-207ENST00000487447 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
CLIP2-207ENST00000487447 A0A0A0MQY5 61 aa2.32□□□□□ -2.04
CLIP2-207ENST00000487447 H3BS24 57 aa2.24□□□□□ -2.05
CLIP2-207ENST00000487447 INE1O15225 51 aa2.2□□□□□ -2.06
CLIP2-207ENST00000487447 PRM1P04553 51 aa2.08□□□□□ -2.08
CLIP2-207ENST00000487447 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CLIP2-207ENST00000487447 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
CLIP2-207ENST00000487447 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CLIP2-207ENST00000487447 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 119.1 ms