RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
GCA-210ENST00000487445 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
GCA-210ENST00000487445 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
GCA-210ENST00000487445 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
GCA-210ENST00000487445 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
GCA-210ENST00000487445 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
GCA-210ENST00000487445 H3BS24 57 aa5.51□□□□□ -1.53
GCA-210ENST00000487445 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
GCA-210ENST00000487445 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
GCA-210ENST00000487445 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
GCA-210ENST00000487445 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
GCA-210ENST00000487445 MT1EP04732 61 aa5.3□□□□□ -1.56
GCA-210ENST00000487445 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
GCA-210ENST00000487445 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
GCA-210ENST00000487445 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
GCA-210ENST00000487445 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
GCA-210ENST00000487445 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
GCA-210ENST00000487445 MT1LQ93083 61 aa5.17□□□□□ -1.58
GCA-210ENST00000487445 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
GCA-210ENST00000487445 SPRR2EP22531 72 aa5.12□□□□□ -1.59
GCA-210ENST00000487445 SPRR2BP35325 72 aa5.12□□□□□ -1.59
GCA-210ENST00000487445 SPRR2AP35326 72 aa5.12□□□□□ -1.59
GCA-210ENST00000487445 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
GCA-210ENST00000487445 MT1GP13640 62 aa5.07□□□□□ -1.6
GCA-210ENST00000487445 NEBP20929 6669 aa5.06□□□□□ -1.6
GCA-210ENST00000487445 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
GCA-210ENST00000487445 MT1MQ8N339 61 aa5□□□□□ -1.61
GCA-210ENST00000487445 SPRR2DP22532 72 aa4.94□□□□□ -1.62
GCA-210ENST00000487445 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
GCA-210ENST00000487445 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
GCA-210ENST00000487445 A0A0A0MQY5 61 aa4.9□□□□□ -1.62
GCA-210ENST00000487445 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
GCA-210ENST00000487445 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
GCA-210ENST00000487445 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
GCA-210ENST00000487445 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
GCA-210ENST00000487445 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
GCA-210ENST00000487445 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
GCA-210ENST00000487445 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
GCA-210ENST00000487445 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
GCA-210ENST00000487445 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
GCA-210ENST00000487445 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
GCA-210ENST00000487445 MT1AP04731 61 aa4.39□□□□□ -1.71
GCA-210ENST00000487445 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
GCA-210ENST00000487445 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
GCA-210ENST00000487445 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
GCA-210ENST00000487445 MT4P47944 62 aa4.32□□□□□ -1.72
GCA-210ENST00000487445 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
GCA-210ENST00000487445 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
GCA-210ENST00000487445 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
GCA-210ENST00000487445 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
GCA-210ENST00000487445 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
GCA-210ENST00000487445 MT3P25713 68 aa4□□□□□ -1.77
GCA-210ENST00000487445 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
GCA-210ENST00000487445 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
GCA-210ENST00000487445 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
GCA-210ENST00000487445 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
GCA-210ENST00000487445 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
GCA-210ENST00000487445 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
GCA-210ENST00000487445 INE1O15225 51 aa3.68□□□□□ -1.82
GCA-210ENST00000487445 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
GCA-210ENST00000487445 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
GCA-210ENST00000487445 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
GCA-210ENST00000487445 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
GCA-210ENST00000487445 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
GCA-210ENST00000487445 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
GCA-210ENST00000487445 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
GCA-210ENST00000487445 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
GCA-210ENST00000487445 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
GCA-210ENST00000487445 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
GCA-210ENST00000487445 PRM1P04553 51 aa3.09□□□□□ -1.91
GCA-210ENST00000487445 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
GCA-210ENST00000487445 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
GCA-210ENST00000487445 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
GCA-210ENST00000487445 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
GCA-210ENST00000487445 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
GCA-210ENST00000487445 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
GCA-210ENST00000487445 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
GCA-210ENST00000487445 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms