RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
SEMA4D-219ENST00000486935 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
SEMA4D-219ENST00000486935 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
SEMA4D-219ENST00000486935 KRTAP19-7Q3SYF9 63 aa5.75□□□□□ -1.49
SEMA4D-219ENST00000486935 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
SEMA4D-219ENST00000486935 MT1EP04732 61 aa5.71□□□□□ -1.5
SEMA4D-219ENST00000486935 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SEMA4D-219ENST00000486935 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
SEMA4D-219ENST00000486935 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
SEMA4D-219ENST00000486935 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
SEMA4D-219ENST00000486935 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
SEMA4D-219ENST00000486935 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
SEMA4D-219ENST00000486935 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
SEMA4D-219ENST00000486935 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
SEMA4D-219ENST00000486935 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
SEMA4D-219ENST00000486935 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
SEMA4D-219ENST00000486935 MT1GP13640 62 aa5.54□□□□□ -1.52
SEMA4D-219ENST00000486935 GPR98Q8WXG9 6306 aa5.49□□□□□ -1.53
SEMA4D-219ENST00000486935 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SEMA4D-219ENST00000486935 MT1LQ93083 61 aa5.44□□□□□ -1.54
SEMA4D-219ENST00000486935 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
SEMA4D-219ENST00000486935 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
SEMA4D-219ENST00000486935 MT4P47944 62 aa5.36□□□□□ -1.55
SEMA4D-219ENST00000486935 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
SEMA4D-219ENST00000486935 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
SEMA4D-219ENST00000486935 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
SEMA4D-219ENST00000486935 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
SEMA4D-219ENST00000486935 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
SEMA4D-219ENST00000486935 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SEMA4D-219ENST00000486935 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
SEMA4D-219ENST00000486935 H3BS24 57 aa5.19□□□□□ -1.58
SEMA4D-219ENST00000486935 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
SEMA4D-219ENST00000486935 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
SEMA4D-219ENST00000486935 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
SEMA4D-219ENST00000486935 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
SEMA4D-219ENST00000486935 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
SEMA4D-219ENST00000486935 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
SEMA4D-219ENST00000486935 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
SEMA4D-219ENST00000486935 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
SEMA4D-219ENST00000486935 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
SEMA4D-219ENST00000486935 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
SEMA4D-219ENST00000486935 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
SEMA4D-219ENST00000486935 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
SEMA4D-219ENST00000486935 MT1AP04731 61 aa4.63□□□□□ -1.67
SEMA4D-219ENST00000486935 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
SEMA4D-219ENST00000486935 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
SEMA4D-219ENST00000486935 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
SEMA4D-219ENST00000486935 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SEMA4D-219ENST00000486935 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
SEMA4D-219ENST00000486935 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
SEMA4D-219ENST00000486935 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SEMA4D-219ENST00000486935 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SEMA4D-219ENST00000486935 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
SEMA4D-219ENST00000486935 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
SEMA4D-219ENST00000486935 MT3P25713 68 aa4.25□□□□□ -1.73
SEMA4D-219ENST00000486935 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
SEMA4D-219ENST00000486935 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.74
SEMA4D-219ENST00000486935 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
SEMA4D-219ENST00000486935 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
SEMA4D-219ENST00000486935 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SEMA4D-219ENST00000486935 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
SEMA4D-219ENST00000486935 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
SEMA4D-219ENST00000486935 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
SEMA4D-219ENST00000486935 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
SEMA4D-219ENST00000486935 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SEMA4D-219ENST00000486935 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
SEMA4D-219ENST00000486935 INE1O15225 51 aa3.48□□□□□ -1.85
SEMA4D-219ENST00000486935 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
SEMA4D-219ENST00000486935 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
SEMA4D-219ENST00000486935 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
SEMA4D-219ENST00000486935 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SEMA4D-219ENST00000486935 PRM1P04553 51 aa3.13□□□□□ -1.91
SEMA4D-219ENST00000486935 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SEMA4D-219ENST00000486935 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
SEMA4D-219ENST00000486935 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
SEMA4D-219ENST00000486935 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SEMA4D-219ENST00000486935 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
SEMA4D-219ENST00000486935 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 38.7 ms