RNA–Protein interactions for RNA: ENST00000486878.2

SCN2A-206, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-206ENST00000486878 NEBP20929 6669 aa2.61□□□□□ -1.99
SCN2A-206ENST00000486878 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
SCN2A-206ENST00000486878 H0YAA0 97 aa2.57□□□□□ -2
SCN2A-206ENST00000486878 HTN3P15516 51 aa2.57□□□□□ -2
SCN2A-206ENST00000486878 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
SCN2A-206ENST00000486878 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
SCN2A-206ENST00000486878 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SCN2A-206ENST00000486878 Q6ZSA8 131 aa2.55□□□□□ -2
SCN2A-206ENST00000486878 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
SCN2A-206ENST00000486878 USH2AO75445 5202 aa2.54□□□□□ -2
SCN2A-206ENST00000486878 SPART-AS1P0CW21 52 aa2.53□□□□□ -2
SCN2A-206ENST00000486878 DEFB130BP0DP73 79 aa2.5□□□□□ -2.01
SCN2A-206ENST00000486878 DEFB130AP0DP74 79 aa2.5□□□□□ -2.01
SCN2A-206ENST00000486878 H3BNG1 76 aa2.48□□□□□ -2.01
SCN2A-206ENST00000486878 A0A096LPF7 62 aa2.47□□□□□ -2.01
SCN2A-206ENST00000486878 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
SCN2A-206ENST00000486878 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
SCN2A-206ENST00000486878 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
SCN2A-206ENST00000486878 PRLHP81277 87 aa2.42□□□□□ -2.02
SCN2A-206ENST00000486878 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
SCN2A-206ENST00000486878 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
SCN2A-206ENST00000486878 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
SCN2A-206ENST00000486878 KMT2DO14686 5537 aa2.38□□□□□ -2.03
SCN2A-206ENST00000486878 SPINK1P00995 79 aa2.38□□□□□ -2.03
SCN2A-206ENST00000486878 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
SCN2A-206ENST00000486878 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
SCN2A-206ENST00000486878 A0A096LNI7 61 aa2.33□□□□□ -2.04
SCN2A-206ENST00000486878 S4R3F8 94 aa2.33□□□□□ -2.04
SCN2A-206ENST00000486878 MT1HP80294 61 aa2.32□□□□□ -2.04
SCN2A-206ENST00000486878 SPINK6Q6UWN8 80 aa2.3□□□□□ -2.04
SCN2A-206ENST00000486878 KRTAP4-1Q9BYQ7 146 aa2.29□□□□□ -2.04
SCN2A-206ENST00000486878 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
SCN2A-206ENST00000486878 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
SCN2A-206ENST00000486878 A0A0D9SG42 100 aa2.24□□□□□ -2.05
SCN2A-206ENST00000486878 M0QZ58 72 aa2.23□□□□□ -2.05
SCN2A-206ENST00000486878 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
SCN2A-206ENST00000486878 M0R2T5 61 aa2.2□□□□□ -2.06
SCN2A-206ENST00000486878 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
SCN2A-206ENST00000486878 KRTAP19-6Q3LI70 58 aa2.19□□□□□ -2.06
SCN2A-206ENST00000486878 RPS29P62273 56 aaKnown RBP2.17□□□□□ -2.06
SCN2A-206ENST00000486878 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
SCN2A-206ENST00000486878 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
SCN2A-206ENST00000486878 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
SCN2A-206ENST00000486878 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
SCN2A-206ENST00000486878 SPRR2EP22531 72 aa2.02□□□□□ -2.09
SCN2A-206ENST00000486878 SPRR2BP35325 72 aa2.02□□□□□ -2.09
SCN2A-206ENST00000486878 SPRR2AP35326 72 aa2.02□□□□□ -2.09
SCN2A-206ENST00000486878 MT2AP02795 61 aa2.01□□□□□ -2.09
SCN2A-206ENST00000486878 MT1FP04733 61 aa2.01□□□□□ -2.09
SCN2A-206ENST00000486878 TNP1P09430 55 aa1.98□□□□□ -2.09
SCN2A-206ENST00000486878 SPRR2DP22532 72 aa1.96□□□□□ -2.1
SCN2A-206ENST00000486878 C9orf92A6NGG3 77 aa1.94□□□□□ -2.1
SCN2A-206ENST00000486878 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
SCN2A-206ENST00000486878 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SCN2A-206ENST00000486878 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
SCN2A-206ENST00000486878 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
SCN2A-206ENST00000486878 MT4P47944 62 aa1.78□□□□□ -2.12
SCN2A-206ENST00000486878 MT1BP07438 61 aa1.76□□□□□ -2.13
SCN2A-206ENST00000486878 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
SCN2A-206ENST00000486878 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
SCN2A-206ENST00000486878 SPRR2GQ9BYE4 73 aa1.61□□□□□ -2.15
SCN2A-206ENST00000486878 MT1XP80297 61 aa1.57□□□□□ -2.16
SCN2A-206ENST00000486878 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
SCN2A-206ENST00000486878 PRM1P04553 51 aa1.47□□□□□ -2.17
SCN2A-206ENST00000486878 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.18
SCN2A-206ENST00000486878 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
SCN2A-206ENST00000486878 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
SCN2A-206ENST00000486878 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
SCN2A-206ENST00000486878 MT1EP04732 61 aa1.39□□□□□ -2.19
SCN2A-206ENST00000486878 MT1AP04731 61 aa1.38□□□□□ -2.19
SCN2A-206ENST00000486878 MT1MQ8N339 61 aa1.34□□□□□ -2.19
SCN2A-206ENST00000486878 MT1GP13640 62 aa1.32□□□□□ -2.2
SCN2A-206ENST00000486878 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
SCN2A-206ENST00000486878 MT1LQ93083 61 aa1.3□□□□□ -2.2
SCN2A-206ENST00000486878 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
SCN2A-206ENST00000486878 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
SCN2A-206ENST00000486878 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
SCN2A-206ENST00000486878 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms