RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
SF1-216ENST00000486867 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
SF1-216ENST00000486867 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
SF1-216ENST00000486867 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
SF1-216ENST00000486867 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
SF1-216ENST00000486867 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
SF1-216ENST00000486867 K7ERS5 55 aa4.75□□□□□ -1.65
SF1-216ENST00000486867 MT1GP13640 62 aa4.74□□□□□ -1.65
SF1-216ENST00000486867 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
SF1-216ENST00000486867 MT1LQ93083 61 aa4.71□□□□□ -1.66
SF1-216ENST00000486867 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
SF1-216ENST00000486867 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
SF1-216ENST00000486867 MT1MQ8N339 61 aa4.65□□□□□ -1.67
SF1-216ENST00000486867 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
SF1-216ENST00000486867 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
SF1-216ENST00000486867 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
SF1-216ENST00000486867 ROMO1P60602 79 aa4.49□□□□□ -1.69
SF1-216ENST00000486867 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
SF1-216ENST00000486867 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
SF1-216ENST00000486867 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
SF1-216ENST00000486867 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
SF1-216ENST00000486867 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
SF1-216ENST00000486867 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
SF1-216ENST00000486867 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
SF1-216ENST00000486867 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
SF1-216ENST00000486867 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
SF1-216ENST00000486867 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
SF1-216ENST00000486867 MT4P47944 62 aa4.23□□□□□ -1.73
SF1-216ENST00000486867 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.74
SF1-216ENST00000486867 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
SF1-216ENST00000486867 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
SF1-216ENST00000486867 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
SF1-216ENST00000486867 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
SF1-216ENST00000486867 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
SF1-216ENST00000486867 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
SF1-216ENST00000486867 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
SF1-216ENST00000486867 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
SF1-216ENST00000486867 MT1AP04731 61 aa4.02□□□□□ -1.77
SF1-216ENST00000486867 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
SF1-216ENST00000486867 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
SF1-216ENST00000486867 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
SF1-216ENST00000486867 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
SF1-216ENST00000486867 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
SF1-216ENST00000486867 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SF1-216ENST00000486867 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
SF1-216ENST00000486867 H3BS24 57 aa3.82□□□□□ -1.8
SF1-216ENST00000486867 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
SF1-216ENST00000486867 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
SF1-216ENST00000486867 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
SF1-216ENST00000486867 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
SF1-216ENST00000486867 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
SF1-216ENST00000486867 MT3P25713 68 aa3.65□□□□□ -1.83
SF1-216ENST00000486867 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
SF1-216ENST00000486867 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
SF1-216ENST00000486867 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SF1-216ENST00000486867 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
SF1-216ENST00000486867 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
SF1-216ENST00000486867 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SF1-216ENST00000486867 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
SF1-216ENST00000486867 INE1O15225 51 aa3.25□□□□□ -1.89
SF1-216ENST00000486867 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SF1-216ENST00000486867 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
SF1-216ENST00000486867 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
SF1-216ENST00000486867 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
SF1-216ENST00000486867 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
SF1-216ENST00000486867 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
SF1-216ENST00000486867 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
SF1-216ENST00000486867 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
SF1-216ENST00000486867 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SF1-216ENST00000486867 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
SF1-216ENST00000486867 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
SF1-216ENST00000486867 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SF1-216ENST00000486867 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SF1-216ENST00000486867 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
SF1-216ENST00000486867 PRM1P04553 51 aa2.29□□□□□ -2.04
SF1-216ENST00000486867 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SF1-216ENST00000486867 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SF1-216ENST00000486867 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 90.6 ms