RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
APTX-228ENST00000486724 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
APTX-228ENST00000486724 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
APTX-228ENST00000486724 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
APTX-228ENST00000486724 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
APTX-228ENST00000486724 MT1BP07438 61 aa3.82□□□□□ -1.8
APTX-228ENST00000486724 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
APTX-228ENST00000486724 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
APTX-228ENST00000486724 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
APTX-228ENST00000486724 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
APTX-228ENST00000486724 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
APTX-228ENST00000486724 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
APTX-228ENST00000486724 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
APTX-228ENST00000486724 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
APTX-228ENST00000486724 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
APTX-228ENST00000486724 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
APTX-228ENST00000486724 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
APTX-228ENST00000486724 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
APTX-228ENST00000486724 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
APTX-228ENST00000486724 R4GN34 69 aa3.63□□□□□ -1.83
APTX-228ENST00000486724 INE1O15225 51 aa3.6□□□□□ -1.83
APTX-228ENST00000486724 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
APTX-228ENST00000486724 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
APTX-228ENST00000486724 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
APTX-228ENST00000486724 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
APTX-228ENST00000486724 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
APTX-228ENST00000486724 MT4P47944 62 aa3.45□□□□□ -1.86
APTX-228ENST00000486724 TNP1P09430 55 aa3.44□□□□□ -1.86
APTX-228ENST00000486724 MT1XP80297 61 aa3.43□□□□□ -1.86
APTX-228ENST00000486724 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
APTX-228ENST00000486724 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
APTX-228ENST00000486724 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
APTX-228ENST00000486724 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
APTX-228ENST00000486724 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
APTX-228ENST00000486724 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
APTX-228ENST00000486724 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
APTX-228ENST00000486724 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
APTX-228ENST00000486724 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
APTX-228ENST00000486724 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
APTX-228ENST00000486724 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
APTX-228ENST00000486724 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
APTX-228ENST00000486724 MT1EP04732 61 aa3.08□□□□□ -1.92
APTX-228ENST00000486724 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
APTX-228ENST00000486724 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
APTX-228ENST00000486724 MT3P25713 68 aa3.06□□□□□ -1.92
APTX-228ENST00000486724 MT1GP13640 62 aa3.04□□□□□ -1.92
APTX-228ENST00000486724 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
APTX-228ENST00000486724 MT1MQ8N339 61 aa2.98□□□□□ -1.93
APTX-228ENST00000486724 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
APTX-228ENST00000486724 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
APTX-228ENST00000486724 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
APTX-228ENST00000486724 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
APTX-228ENST00000486724 MT1LQ93083 61 aa2.86□□□□□ -1.95
APTX-228ENST00000486724 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
APTX-228ENST00000486724 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
APTX-228ENST00000486724 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
APTX-228ENST00000486724 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
APTX-228ENST00000486724 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
APTX-228ENST00000486724 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
APTX-228ENST00000486724 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
APTX-228ENST00000486724 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
APTX-228ENST00000486724 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
APTX-228ENST00000486724 MT1AP04731 61 aa2.44□□□□□ -2.02
APTX-228ENST00000486724 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
APTX-228ENST00000486724 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
APTX-228ENST00000486724 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
APTX-228ENST00000486724 PRM1P04553 51 aa2.24□□□□□ -2.05
APTX-228ENST00000486724 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
APTX-228ENST00000486724 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
APTX-228ENST00000486724 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
APTX-228ENST00000486724 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
APTX-228ENST00000486724 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
APTX-228ENST00000486724 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
APTX-228ENST00000486724 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
APTX-228ENST00000486724 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
APTX-228ENST00000486724 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
APTX-228ENST00000486724 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
APTX-228ENST00000486724 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms