RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	KRTAP4-7	Q9BYR0	210 aa		3.74	□□□□□ -1.81
KIFC1-213	ENST00000486695	KRTAP10-5	P60370	271 aa		3.73	□□□□□ -1.81
KIFC1-213	ENST00000486695	MT1X	P80297	61 aa		3.73	□□□□□ -1.81
KIFC1-213	ENST00000486695	SYNE2	Q8WXH0	6885 aa	Known RBP	3.71	□□□□□ -1.81
KIFC1-213	ENST00000486695	MT3	P25713	68 aa		3.65	□□□□□ -1.83
KIFC1-213	ENST00000486695	PP632	Q6XCG6	107 aa		3.63	□□□□□ -1.83
KIFC1-213	ENST00000486695	KRTAP10-7	P60409	375 aa	Predicted RBP	3.58	□□□□□ -1.84
KIFC1-213	ENST00000486695	KRTAP10-12	P60413	245 aa		3.57	□□□□□ -1.84
KIFC1-213	ENST00000486695	MUC12	Q9UKN1	5478 aa		3.56	□□□□□ -1.84
KIFC1-213	ENST00000486695	KRTAP4-2	Q9BYR5	136 aa		3.56	□□□□□ -1.84
KIFC1-213	ENST00000486695	KRTAP20-1	Q3LI63	56 aa		3.55	□□□□□ -1.84
KIFC1-213	ENST00000486695	LCE3A	Q5TA76	89 aa		3.54	□□□□□ -1.84
KIFC1-213	ENST00000486695	NEB	P20929	6669 aa		3.52	□□□□□ -1.85
KIFC1-213	ENST00000486695	KRTAP5-9	P26371	169 aa		3.48	□□□□□ -1.85
KIFC1-213	ENST00000486695	KRTAP8-1	Q8IUC2	63 aa		3.47	□□□□□ -1.85
KIFC1-213	ENST00000486695	MDN1	Q9NU22	5596 aa		3.44	□□□□□ -1.86
KIFC1-213	ENST00000486695	KMT2D	O14686	5537 aa		3.43	□□□□□ -1.86
KIFC1-213	ENST00000486695	KRTAP2-3	P0C7H8	128 aa		3.42	□□□□□ -1.86
KIFC1-213	ENST00000486695	KRTAP2-4	Q9BYR9	128 aa		3.42	□□□□□ -1.86
KIFC1-213	ENST00000486695	KRTAP2-2	Q9BYT5	123 aa		3.42	□□□□□ -1.86
KIFC1-213	ENST00000486695	KRTAP12-3	P60328	96 aa		3.41	□□□□□ -1.86
KIFC1-213	ENST00000486695	KRTAP19-5	Q3LI72	72 aa		3.39	□□□□□ -1.87
KIFC1-213	ENST00000486695	LCE1F	Q5T754	118 aa		3.37	□□□□□ -1.87
KIFC1-213	ENST00000486695	SPRR2F	Q96RM1	72 aa		3.34	□□□□□ -1.87
KIFC1-213	ENST00000486695	SPRR2E	P22531	72 aa		3.33	□□□□□ -1.88
KIFC1-213	ENST00000486695	SPRR2B	P35325	72 aa		3.33	□□□□□ -1.88
KIFC1-213	ENST00000486695	SPRR2A	P35326	72 aa		3.33	□□□□□ -1.88
KIFC1-213	ENST00000486695	KRTAP19-7	Q3SYF9	63 aa		3.32	□□□□□ -1.88
KIFC1-213	ENST00000486695	KRTAP2-1	Q9BYU5	128 aa		3.29	□□□□□ -1.88
KIFC1-213	ENST00000486695	MT1E	P04732	61 aa		3.28	□□□□□ -1.88
KIFC1-213	ENST00000486695	SPRR2D	P22532	72 aa		3.22	□□□□□ -1.89
KIFC1-213	ENST00000486695	MT1L	Q93083	61 aa		3.21	□□□□□ -1.9
KIFC1-213	ENST00000486695	LCE3C	Q5T5A8	94 aa		3.19	□□□□□ -1.9
KIFC1-213	ENST00000486695	KRTAP19-3	Q7Z4W3	81 aa		3.17	□□□□□ -1.9
KIFC1-213	ENST00000486695	MT1G	P13640	62 aa		3.16	□□□□□ -1.9
KIFC1-213	ENST00000486695	SPRR5	A0A1B0GTR4	108 aa		3.15	□□□□□ -1.91
KIFC1-213	ENST00000486695	LUZP6	Q538Z0	58 aa		3.14	□□□□□ -1.91
KIFC1-213	ENST00000486695	MT1M	Q8N339	61 aa		3.1	□□□□□ -1.91
KIFC1-213	ENST00000486695	KRTAP5-3	Q6L8H2	238 aa		3.06	□□□□□ -1.92
KIFC1-213	ENST00000486695	KRTAP4-3	Q9BYR4	195 aa		3.01	□□□□□ -1.93
KIFC1-213	ENST00000486695	KRTAP9-6	A8MVA2	160 aa		2.96	□□□□□ -1.94
KIFC1-213	ENST00000486695	DST	Q03001	7570 aa	Known RBP	2.95	□□□□□ -1.94
KIFC1-213	ENST00000486695	GPR98	Q8WXG9	6306 aa		2.95	□□□□□ -1.94
KIFC1-213	ENST00000486695	LCE3E	Q5T5B0	92 aa		2.85	□□□□□ -1.95
KIFC1-213	ENST00000486695	MT4	P47944	62 aa		2.83	□□□□□ -1.96
KIFC1-213	ENST00000486695	HMCN1	Q96RW7	5635 aa		2.82	□□□□□ -1.96
KIFC1-213	ENST00000486695	LCE1E	Q5T753	118 aa		2.8	□□□□□ -1.96
KIFC1-213	ENST00000486695	KRTAP5-10	Q6L8G5	202 aa		2.79	□□□□□ -1.96
KIFC1-213	ENST00000486695	AHNAK2	Q8IVF2	5795 aa		2.78	□□□□□ -1.96
KIFC1-213	ENST00000486695	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.77	□□□□□ -1.97
KIFC1-213	ENST00000486695	MT1A	P04731	61 aa		2.75	□□□□□ -1.97
KIFC1-213	ENST00000486695	KRTAP5-4	Q6L8H1	288 aa		2.75	□□□□□ -1.97
KIFC1-213	ENST00000486695	KRTAP6-1	Q3LI64	71 aa		2.7	□□□□□ -1.98
KIFC1-213	ENST00000486695	KRTAP5-7	Q6L8G8	165 aa		2.7	□□□□□ -1.98
KIFC1-213	ENST00000486695	KRTAP12-4	P60329	112 aa		2.64	□□□□□ -1.99
KIFC1-213	ENST00000486695	KRTAP20-2	Q3LI61	65 aa		2.61	□□□□□ -1.99
KIFC1-213	ENST00000486695	SYNE1	Q8NF91	8797 aa	Known RBP	2.58	□□□□□ -2
KIFC1-213	ENST00000486695	KRTAP5-11	Q6L8G4	156 aa		2.52	□□□□□ -2.01
KIFC1-213	ENST00000486695	INE1	O15225	51 aa		2.5	□□□□□ -2.01
KIFC1-213	ENST00000486695	KRTAP6-2	Q3LI66	62 aa		2.5	□□□□□ -2.01
KIFC1-213	ENST00000486695	LCE3D	Q9BYE3	92 aa		2.48	□□□□□ -2.01
KIFC1-213	ENST00000486695	KRTAP5-2	Q701N4	177 aa		2.4	□□□□□ -2.03
KIFC1-213	ENST00000486695	KRTAP5-8	O75690	187 aa		2.36	□□□□□ -2.03
KIFC1-213	ENST00000486695	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.32	□□□□□ -2.04
KIFC1-213	ENST00000486695	MUC5AC	P98088	5654 aa		2.31	□□□□□ -2.04
KIFC1-213	ENST00000486695	AHNAK	Q09666	5890 aa	Known RBP	2.3	□□□□□ -2.04
KIFC1-213	ENST00000486695	OBSCN	Q5VST9	7968 aa		2.27	□□□□□ -2.05
KIFC1-213	ENST00000486695	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.22	□□□□□ -2.05
KIFC1-213	ENST00000486695	KRTAP5-1	Q6L8H4	278 aa		2.17	□□□□□ -2.06
KIFC1-213	ENST00000486695	LCE1B	Q5T7P3	118 aa		2.05	□□□□□ -2.08
KIFC1-213	ENST00000486695	PRM1	P04553	51 aa		2.01	□□□□□ -2.09
KIFC1-213	ENST00000486695	LCE1C	Q5T751	118 aa		2.01	□□□□□ -2.09
KIFC1-213	ENST00000486695	KRTAP4-4	Q9BYR3	166 aa		1.84	□□□□□ -2.11
KIFC1-213	ENST00000486695	KRTAP21-2	Q3LI59	83 aa		1.76	□□□□□ -2.13
KIFC1-213	ENST00000486695	PHGR1	C9JFL3	82 aa		1.63	□□□□□ -2.15
KIFC1-213	ENST00000486695	MUC19	Q7Z5P9	8384 aa		1.46	□□□□□ -2.18
KIFC1-213	ENST00000486695	KRTAP21-1	Q3LI58	79 aa		1.24	□□□□□ -2.21
KIFC1-213	ENST00000486695	MUC16	Q8WXI7	14507 aa		1.06	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 89.1 ms