RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
HDAC6-229ENST00000486665 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
HDAC6-229ENST00000486665 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
HDAC6-229ENST00000486665 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
HDAC6-229ENST00000486665 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
HDAC6-229ENST00000486665 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
HDAC6-229ENST00000486665 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
HDAC6-229ENST00000486665 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
HDAC6-229ENST00000486665 MT1EP04732 61 aa4.71□□□□□ -1.66
HDAC6-229ENST00000486665 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
HDAC6-229ENST00000486665 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
HDAC6-229ENST00000486665 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
HDAC6-229ENST00000486665 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
HDAC6-229ENST00000486665 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
HDAC6-229ENST00000486665 MT1LQ93083 61 aa4.56□□□□□ -1.68
HDAC6-229ENST00000486665 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
HDAC6-229ENST00000486665 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
HDAC6-229ENST00000486665 MT1GP13640 62 aa4.5□□□□□ -1.69
HDAC6-229ENST00000486665 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
HDAC6-229ENST00000486665 MT1MQ8N339 61 aa4.45□□□□□ -1.7
HDAC6-229ENST00000486665 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
HDAC6-229ENST00000486665 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
HDAC6-229ENST00000486665 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
HDAC6-229ENST00000486665 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
HDAC6-229ENST00000486665 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
HDAC6-229ENST00000486665 MT4P47944 62 aa4.35□□□□□ -1.71
HDAC6-229ENST00000486665 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
HDAC6-229ENST00000486665 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
HDAC6-229ENST00000486665 H3BS24 57 aa4.33□□□□□ -1.72
HDAC6-229ENST00000486665 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
HDAC6-229ENST00000486665 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
HDAC6-229ENST00000486665 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
HDAC6-229ENST00000486665 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
HDAC6-229ENST00000486665 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
HDAC6-229ENST00000486665 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
HDAC6-229ENST00000486665 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
HDAC6-229ENST00000486665 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
HDAC6-229ENST00000486665 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
HDAC6-229ENST00000486665 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
HDAC6-229ENST00000486665 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-229ENST00000486665 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
HDAC6-229ENST00000486665 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
HDAC6-229ENST00000486665 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
HDAC6-229ENST00000486665 MT1AP04731 61 aa3.87□□□□□ -1.79
HDAC6-229ENST00000486665 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
HDAC6-229ENST00000486665 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
HDAC6-229ENST00000486665 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
HDAC6-229ENST00000486665 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
HDAC6-229ENST00000486665 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
HDAC6-229ENST00000486665 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
HDAC6-229ENST00000486665 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
HDAC6-229ENST00000486665 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
HDAC6-229ENST00000486665 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
HDAC6-229ENST00000486665 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
HDAC6-229ENST00000486665 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
HDAC6-229ENST00000486665 MT3P25713 68 aa3.52□□□□□ -1.85
HDAC6-229ENST00000486665 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
HDAC6-229ENST00000486665 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
HDAC6-229ENST00000486665 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
HDAC6-229ENST00000486665 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
HDAC6-229ENST00000486665 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
HDAC6-229ENST00000486665 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
HDAC6-229ENST00000486665 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
HDAC6-229ENST00000486665 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
HDAC6-229ENST00000486665 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
HDAC6-229ENST00000486665 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
HDAC6-229ENST00000486665 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
HDAC6-229ENST00000486665 INE1O15225 51 aa2.76□□□□□ -1.97
HDAC6-229ENST00000486665 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
HDAC6-229ENST00000486665 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
HDAC6-229ENST00000486665 PRM1P04553 51 aa2.55□□□□□ -2
HDAC6-229ENST00000486665 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
HDAC6-229ENST00000486665 LCE1FQ5T754 118 aa2.54□□□□□ -2
HDAC6-229ENST00000486665 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
HDAC6-229ENST00000486665 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
HDAC6-229ENST00000486665 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
HDAC6-229ENST00000486665 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
HDAC6-229ENST00000486665 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 44.4 ms