RNA–Protein interactions for RNA: ENST00000485744.5

HMCN1-204, Transcript of hemicentin 1, humanhuman

TSL 2

Gene HMCN1, Length 1,884 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-204ENST00000485744 MDN1Q9NU22 5596 aa3.96□□□□□ -1.77
HMCN1-204ENST00000485744 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
HMCN1-204ENST00000485744 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
HMCN1-204ENST00000485744 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
HMCN1-204ENST00000485744 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
HMCN1-204ENST00000485744 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
HMCN1-204ENST00000485744 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
HMCN1-204ENST00000485744 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
HMCN1-204ENST00000485744 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
HMCN1-204ENST00000485744 NEBP20929 6669 aa3.83□□□□□ -1.8
HMCN1-204ENST00000485744 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
HMCN1-204ENST00000485744 MT1EP04732 61 aa3.79□□□□□ -1.8
HMCN1-204ENST00000485744 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
HMCN1-204ENST00000485744 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
HMCN1-204ENST00000485744 SPRR2EP22531 72 aa3.75□□□□□ -1.81
HMCN1-204ENST00000485744 SPRR2BP35325 72 aa3.75□□□□□ -1.81
HMCN1-204ENST00000485744 SPRR2AP35326 72 aa3.75□□□□□ -1.81
HMCN1-204ENST00000485744 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
HMCN1-204ENST00000485744 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
HMCN1-204ENST00000485744 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
HMCN1-204ENST00000485744 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
HMCN1-204ENST00000485744 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
HMCN1-204ENST00000485744 MT1LQ93083 61 aa3.68□□□□□ -1.82
HMCN1-204ENST00000485744 NDUFAF8A1L188 74 aa3.65□□□□□ -1.82
HMCN1-204ENST00000485744 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
HMCN1-204ENST00000485744 SPRR2DP22532 72 aa3.61□□□□□ -1.83
HMCN1-204ENST00000485744 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
HMCN1-204ENST00000485744 MT1GP13640 62 aa3.6□□□□□ -1.83
HMCN1-204ENST00000485744 MT1MQ8N339 61 aa3.58□□□□□ -1.84
HMCN1-204ENST00000485744 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
HMCN1-204ENST00000485744 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
HMCN1-204ENST00000485744 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
HMCN1-204ENST00000485744 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
HMCN1-204ENST00000485744 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
HMCN1-204ENST00000485744 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
HMCN1-204ENST00000485744 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
HMCN1-204ENST00000485744 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
HMCN1-204ENST00000485744 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
HMCN1-204ENST00000485744 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
HMCN1-204ENST00000485744 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
HMCN1-204ENST00000485744 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
HMCN1-204ENST00000485744 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
HMCN1-204ENST00000485744 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
HMCN1-204ENST00000485744 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
HMCN1-204ENST00000485744 MT4P47944 62 aa3.17□□□□□ -1.9
HMCN1-204ENST00000485744 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
HMCN1-204ENST00000485744 MT1AP04731 61 aa3.11□□□□□ -1.91
HMCN1-204ENST00000485744 INE1O15225 51 aa3.09□□□□□ -1.91
HMCN1-204ENST00000485744 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
HMCN1-204ENST00000485744 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
HMCN1-204ENST00000485744 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
HMCN1-204ENST00000485744 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
HMCN1-204ENST00000485744 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
HMCN1-204ENST00000485744 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
HMCN1-204ENST00000485744 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
HMCN1-204ENST00000485744 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
HMCN1-204ENST00000485744 MT3P25713 68 aa2.82□□□□□ -1.96
HMCN1-204ENST00000485744 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
HMCN1-204ENST00000485744 KRTAP5-8O75690 187 aa2.58□□□□□ -2
HMCN1-204ENST00000485744 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
HMCN1-204ENST00000485744 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
HMCN1-204ENST00000485744 MUC5ACP98088 5654 aa2.53□□□□□ -2
HMCN1-204ENST00000485744 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
HMCN1-204ENST00000485744 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
HMCN1-204ENST00000485744 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
HMCN1-204ENST00000485744 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
HMCN1-204ENST00000485744 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
HMCN1-204ENST00000485744 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
HMCN1-204ENST00000485744 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
HMCN1-204ENST00000485744 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
HMCN1-204ENST00000485744 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
HMCN1-204ENST00000485744 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
HMCN1-204ENST00000485744 PRM1P04553 51 aa2.08□□□□□ -2.08
HMCN1-204ENST00000485744 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
HMCN1-204ENST00000485744 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
HMCN1-204ENST00000485744 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
HMCN1-204ENST00000485744 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
HMCN1-204ENST00000485744 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms