RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
LRIF1-202ENST00000485275 MT1EP04732 61 aa5.34□□□□□ -1.55
LRIF1-202ENST00000485275 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
LRIF1-202ENST00000485275 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
LRIF1-202ENST00000485275 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
LRIF1-202ENST00000485275 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
LRIF1-202ENST00000485275 H3BS24 57 aa5.28□□□□□ -1.56
LRIF1-202ENST00000485275 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
LRIF1-202ENST00000485275 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
LRIF1-202ENST00000485275 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
LRIF1-202ENST00000485275 MT1LQ93083 61 aa5.2□□□□□ -1.58
LRIF1-202ENST00000485275 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
LRIF1-202ENST00000485275 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
LRIF1-202ENST00000485275 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.58
LRIF1-202ENST00000485275 SPRR2EP22531 72 aa5.11□□□□□ -1.59
LRIF1-202ENST00000485275 SPRR2BP35325 72 aa5.11□□□□□ -1.59
LRIF1-202ENST00000485275 SPRR2AP35326 72 aa5.11□□□□□ -1.59
LRIF1-202ENST00000485275 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
LRIF1-202ENST00000485275 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.6
LRIF1-202ENST00000485275 NEBP20929 6669 aa5.06□□□□□ -1.6
LRIF1-202ENST00000485275 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
LRIF1-202ENST00000485275 MT1GP13640 62 aa5.05□□□□□ -1.6
LRIF1-202ENST00000485275 MT1MQ8N339 61 aa5.04□□□□□ -1.6
LRIF1-202ENST00000485275 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
LRIF1-202ENST00000485275 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
LRIF1-202ENST00000485275 SPRR2DP22532 72 aa4.92□□□□□ -1.62
LRIF1-202ENST00000485275 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
LRIF1-202ENST00000485275 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
LRIF1-202ENST00000485275 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
LRIF1-202ENST00000485275 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
LRIF1-202ENST00000485275 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
LRIF1-202ENST00000485275 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.66
LRIF1-202ENST00000485275 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.66
LRIF1-202ENST00000485275 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
LRIF1-202ENST00000485275 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
LRIF1-202ENST00000485275 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
LRIF1-202ENST00000485275 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
LRIF1-202ENST00000485275 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
LRIF1-202ENST00000485275 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
LRIF1-202ENST00000485275 MT1AP04731 61 aa4.4□□□□□ -1.7
LRIF1-202ENST00000485275 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.7
LRIF1-202ENST00000485275 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
LRIF1-202ENST00000485275 MT4P47944 62 aa4.3□□□□□ -1.72
LRIF1-202ENST00000485275 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
LRIF1-202ENST00000485275 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
LRIF1-202ENST00000485275 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
LRIF1-202ENST00000485275 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
LRIF1-202ENST00000485275 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
LRIF1-202ENST00000485275 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
LRIF1-202ENST00000485275 MT3P25713 68 aa3.96□□□□□ -1.78
LRIF1-202ENST00000485275 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
LRIF1-202ENST00000485275 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
LRIF1-202ENST00000485275 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
LRIF1-202ENST00000485275 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
LRIF1-202ENST00000485275 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-202ENST00000485275 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
LRIF1-202ENST00000485275 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
LRIF1-202ENST00000485275 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
LRIF1-202ENST00000485275 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
LRIF1-202ENST00000485275 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
LRIF1-202ENST00000485275 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
LRIF1-202ENST00000485275 INE1O15225 51 aa3.44□□□□□ -1.86
LRIF1-202ENST00000485275 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
LRIF1-202ENST00000485275 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
LRIF1-202ENST00000485275 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
LRIF1-202ENST00000485275 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
LRIF1-202ENST00000485275 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
LRIF1-202ENST00000485275 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
LRIF1-202ENST00000485275 PRM1P04553 51 aa3.07□□□□□ -1.92
LRIF1-202ENST00000485275 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
LRIF1-202ENST00000485275 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
LRIF1-202ENST00000485275 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
LRIF1-202ENST00000485275 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
LRIF1-202ENST00000485275 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LRIF1-202ENST00000485275 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
LRIF1-202ENST00000485275 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
LRIF1-202ENST00000485275 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 119 ms