RNA–Protein interactions for RNA: ENST00000484893.1

GINS1-204, Transcript of GINS complex subunit 1, humanhuman

TSL 5

Gene GINS1, Length 583 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-204ENST00000484893 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
GINS1-204ENST00000484893 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
GINS1-204ENST00000484893 SPRR2DP22532 72 aa4.68□□□□□ -1.66
GINS1-204ENST00000484893 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
GINS1-204ENST00000484893 ROMO1P60602 79 aa4.67□□□□□ -1.66
GINS1-204ENST00000484893 MT1LQ93083 61 aa4.67□□□□□ -1.66
GINS1-204ENST00000484893 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
GINS1-204ENST00000484893 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
GINS1-204ENST00000484893 MT1GP13640 62 aa4.62□□□□□ -1.67
GINS1-204ENST00000484893 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
GINS1-204ENST00000484893 MT1MQ8N339 61 aa4.57□□□□□ -1.68
GINS1-204ENST00000484893 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
GINS1-204ENST00000484893 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
GINS1-204ENST00000484893 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
GINS1-204ENST00000484893 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
GINS1-204ENST00000484893 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
GINS1-204ENST00000484893 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
GINS1-204ENST00000484893 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
GINS1-204ENST00000484893 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
GINS1-204ENST00000484893 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
GINS1-204ENST00000484893 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
GINS1-204ENST00000484893 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
GINS1-204ENST00000484893 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
GINS1-204ENST00000484893 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
GINS1-204ENST00000484893 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
GINS1-204ENST00000484893 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
GINS1-204ENST00000484893 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
GINS1-204ENST00000484893 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
GINS1-204ENST00000484893 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
GINS1-204ENST00000484893 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
GINS1-204ENST00000484893 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
GINS1-204ENST00000484893 H3BS24 57 aa4.12□□□□□ -1.75
GINS1-204ENST00000484893 MT4P47944 62 aa4.08□□□□□ -1.76
GINS1-204ENST00000484893 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
GINS1-204ENST00000484893 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
GINS1-204ENST00000484893 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
GINS1-204ENST00000484893 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
GINS1-204ENST00000484893 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
GINS1-204ENST00000484893 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
GINS1-204ENST00000484893 MT1AP04731 61 aa3.96□□□□□ -1.78
GINS1-204ENST00000484893 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
GINS1-204ENST00000484893 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
GINS1-204ENST00000484893 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
GINS1-204ENST00000484893 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
GINS1-204ENST00000484893 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
GINS1-204ENST00000484893 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
GINS1-204ENST00000484893 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
GINS1-204ENST00000484893 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
GINS1-204ENST00000484893 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
GINS1-204ENST00000484893 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
GINS1-204ENST00000484893 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
GINS1-204ENST00000484893 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
GINS1-204ENST00000484893 MT3P25713 68 aa3.57□□□□□ -1.84
GINS1-204ENST00000484893 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
GINS1-204ENST00000484893 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
GINS1-204ENST00000484893 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
GINS1-204ENST00000484893 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
GINS1-204ENST00000484893 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
GINS1-204ENST00000484893 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
GINS1-204ENST00000484893 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
GINS1-204ENST00000484893 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
GINS1-204ENST00000484893 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
GINS1-204ENST00000484893 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
GINS1-204ENST00000484893 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
GINS1-204ENST00000484893 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
GINS1-204ENST00000484893 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
GINS1-204ENST00000484893 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
GINS1-204ENST00000484893 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
GINS1-204ENST00000484893 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
GINS1-204ENST00000484893 LCE1FQ5T754 118 aa2.54□□□□□ -2
GINS1-204ENST00000484893 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
GINS1-204ENST00000484893 INE1O15225 51 aa2.44□□□□□ -2.02
GINS1-204ENST00000484893 PRM1P04553 51 aa2.42□□□□□ -2.02
GINS1-204ENST00000484893 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
GINS1-204ENST00000484893 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
GINS1-204ENST00000484893 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
GINS1-204ENST00000484893 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
GINS1-204ENST00000484893 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 13.9 ms