RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 KMT2DO14686 5537 aa2.46□□□□□ -2.02
NCL-209ENST00000484328 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
NCL-209ENST00000484328 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
NCL-209ENST00000484328 NEBP20929 6669 aa2.44□□□□□ -2.02
NCL-209ENST00000484328 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
NCL-209ENST00000484328 ROMO1P60602 79 aa2.42□□□□□ -2.02
NCL-209ENST00000484328 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
NCL-209ENST00000484328 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
NCL-209ENST00000484328 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
NCL-209ENST00000484328 MT1EP04732 61 aa2.39□□□□□ -2.03
NCL-209ENST00000484328 KRTAP23-1A1A580 65 aa2.38□□□□□ -2.03
NCL-209ENST00000484328 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
NCL-209ENST00000484328 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
NCL-209ENST00000484328 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
NCL-209ENST00000484328 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
NCL-209ENST00000484328 SPRR2EP22531 72 aa2.35□□□□□ -2.03
NCL-209ENST00000484328 SPRR2BP35325 72 aa2.35□□□□□ -2.03
NCL-209ENST00000484328 SPRR2AP35326 72 aa2.35□□□□□ -2.03
NCL-209ENST00000484328 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
NCL-209ENST00000484328 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
NCL-209ENST00000484328 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
NCL-209ENST00000484328 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
NCL-209ENST00000484328 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
NCL-209ENST00000484328 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
NCL-209ENST00000484328 MT1LQ93083 61 aa2.31□□□□□ -2.04
NCL-209ENST00000484328 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
NCL-209ENST00000484328 MT1GP13640 62 aa2.28□□□□□ -2.04
NCL-209ENST00000484328 SPRR2DP22532 72 aa2.27□□□□□ -2.05
NCL-209ENST00000484328 MT1MQ8N339 61 aa2.25□□□□□ -2.05
NCL-209ENST00000484328 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
NCL-209ENST00000484328 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
NCL-209ENST00000484328 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
NCL-209ENST00000484328 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
NCL-209ENST00000484328 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
NCL-209ENST00000484328 LCE3CQ5T5A8 94 aa2.17□□□□□ -2.06
NCL-209ENST00000484328 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
NCL-209ENST00000484328 PRAC1Q96KF2 57 aa2.17□□□□□ -2.06
NCL-209ENST00000484328 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
NCL-209ENST00000484328 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
NCL-209ENST00000484328 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
NCL-209ENST00000484328 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
NCL-209ENST00000484328 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
NCL-209ENST00000484328 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
NCL-209ENST00000484328 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
NCL-209ENST00000484328 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
NCL-209ENST00000484328 SVIPQ8NHG7 77 aa2.02□□□□□ -2.09
NCL-209ENST00000484328 MT1AP04731 61 aa1.97□□□□□ -2.09
NCL-209ENST00000484328 MT4P47944 62 aa1.96□□□□□ -2.1
NCL-209ENST00000484328 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
NCL-209ENST00000484328 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
NCL-209ENST00000484328 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
NCL-209ENST00000484328 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
NCL-209ENST00000484328 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
NCL-209ENST00000484328 MT3P25713 68 aa1.9□□□□□ -2.11
NCL-209ENST00000484328 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
NCL-209ENST00000484328 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
NCL-209ENST00000484328 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
NCL-209ENST00000484328 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
NCL-209ENST00000484328 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
NCL-209ENST00000484328 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
NCL-209ENST00000484328 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
NCL-209ENST00000484328 NDUFAF8A1L188 74 aa1.62□□□□□ -2.15
NCL-209ENST00000484328 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
NCL-209ENST00000484328 LCE3DQ9BYE3 92 aa1.58□□□□□ -2.16
NCL-209ENST00000484328 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
NCL-209ENST00000484328 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
NCL-209ENST00000484328 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
NCL-209ENST00000484328 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
NCL-209ENST00000484328 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
NCL-209ENST00000484328 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
NCL-209ENST00000484328 A0A0A0MQY5 61 aa1.36□□□□□ -2.19
NCL-209ENST00000484328 INE1O15225 51 aa1.35□□□□□ -2.19
NCL-209ENST00000484328 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
NCL-209ENST00000484328 PRM1P04553 51 aa1.24□□□□□ -2.21
NCL-209ENST00000484328 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
NCL-209ENST00000484328 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
NCL-209ENST00000484328 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
NCL-209ENST00000484328 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms