RNA–Protein interactions for RNA: ENST00000484266.5

CHKB-210, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 1,401 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-210ENST00000484266 KRTAP19-3Q7Z4W3 81 aa11.97□□□□□ -0.49
CHKB-210ENST00000484266 LCE5AQ5TCM9 118 aa11.93□□□□□ -0.5
CHKB-210ENST00000484266 PRO0628Q9UI54 55 aa11.86□□□□□ -0.51
CHKB-210ENST00000484266 MT1LQ93083 61 aa11.76□□□□□ -0.53
CHKB-210ENST00000484266 LCE3BQ5TA77 95 aa11.75□□□□□ -0.53
CHKB-210ENST00000484266 MT1GP13640 62 aa11.74□□□□□ -0.53
CHKB-210ENST00000484266 KRTAP12-3P60328 96 aa11.72□□□□□ -0.53
CHKB-210ENST00000484266 KRTAP2-2Q9BYT5 123 aa11.71□□□□□ -0.53
CHKB-210ENST00000484266 KRTAP2-1Q9BYU5 128 aa11.71□□□□□ -0.53
CHKB-210ENST00000484266 BRK1Q8WUW1 75 aa11.7□□□□□ -0.54
CHKB-210ENST00000484266 ROMO1P60602 79 aa11.67□□□□□ -0.54
CHKB-210ENST00000484266 PP632Q6XCG6 107 aa11.61□□□□□ -0.55
CHKB-210ENST00000484266 KRTAP23-1A1A580 65 aa11.6□□□□□ -0.55
CHKB-210ENST00000484266 MT1MQ8N339 61 aa11.57□□□□□ -0.56
CHKB-210ENST00000484266 DSTQ03001 7570 aaKnown RBP11.42□□□□□ -0.58
CHKB-210ENST00000484266 KRTAP4-3Q9BYR4 195 aa11.29□□□□□ -0.6
CHKB-210ENST00000484266 KRTAP4-7Q9BYR0 210 aa11.23□□□□□ -0.61
CHKB-210ENST00000484266 KRTAP15-1Q3LI76 137 aa11.15□□□□□ -0.62
CHKB-210ENST00000484266 PMAIP1Q13794 54 aa11.12□□□□□ -0.63
CHKB-210ENST00000484266 KRTAP19-4Q3LI73 84 aa11.06□□□□□ -0.64
CHKB-210ENST00000484266 KTN1-AS1Q86SY8 53 aa10.89□□□□□ -0.67
CHKB-210ENST00000484266 LCE3CQ5T5A8 94 aa10.84□□□□□ -0.67
CHKB-210ENST00000484266 KRTAP4-9Q9BYQ8 210 aa10.78□□□□□ -0.68
CHKB-210ENST00000484266 LCE4AQ5TA78 99 aa10.75□□□□□ -0.69
CHKB-210ENST00000484266 KRTAP5-4Q6L8H1 288 aa10.69□□□□□ -0.7
CHKB-210ENST00000484266 LCE1DQ5T752 114 aa10.61□□□□□ -0.71
CHKB-210ENST00000484266 LOC100996750A0A140TA64 210 aa10.6□□□□□ -0.71
CHKB-210ENST00000484266 KRTAP5-5Q701N2 237 aaPredicted RBP10.57□□□□□ -0.72
CHKB-210ENST00000484266 MT4P47944 62 aa10.56□□□□□ -0.72
CHKB-210ENST00000484266 KRTAP4-6Q9BYQ5 205 aa10.34□□□□□ -0.75
CHKB-210ENST00000484266 HMCN1Q96RW7 5635 aa10.33□□□□□ -0.76
CHKB-210ENST00000484266 KRTAP9-6A8MVA2 160 aa10.26□□□□□ -0.77
CHKB-210ENST00000484266 PRAC1Q96KF2 57 aa10.2□□□□□ -0.78
CHKB-210ENST00000484266 KRTAP12-4P60329 112 aa10.09□□□□□ -0.79
CHKB-210ENST00000484266 SPRR5A0A1B0GTR4 108 aa10.05□□□□□ -0.8
CHKB-210ENST00000484266 KRTAP20-2Q3LI61 65 aa10.05□□□□□ -0.8
CHKB-210ENST00000484266 SYNE1Q8NF91 8797 aaKnown RBP10.03□□□□□ -0.8
CHKB-210ENST00000484266 MT1AP04731 61 aa10□□□□□ -0.81
CHKB-210ENST00000484266 KRTAP6-1Q3LI64 71 aa9.92□□□□□ -0.82
CHKB-210ENST00000484266 GPR98Q8WXG9 6306 aa9.75□□□□□ -0.85
CHKB-210ENST00000484266 KRTAP5-3Q6L8H2 238 aa9.73□□□□□ -0.85
CHKB-210ENST00000484266 AHNAK2Q8IVF2 5795 aa9.73□□□□□ -0.85
CHKB-210ENST00000484266 KRTAP9-4Q9BYQ2 154 aa9.6□□□□□ -0.87
CHKB-210ENST00000484266 KRTAP5-10Q6L8G5 202 aa9.56□□□□□ -0.88
CHKB-210ENST00000484266 KRTAP5-2Q701N4 177 aa9.48□□□□□ -0.89
CHKB-210ENST00000484266 KRTAP6-2Q3LI66 62 aa9.35□□□□□ -0.91
CHKB-210ENST00000484266 MT3P25713 68 aa9.11□□□□□ -0.95
CHKB-210ENST00000484266 KRTAP5-7Q6L8G8 165 aa9.09□□□□□ -0.95
CHKB-210ENST00000484266 KRTAP4-11Q9BYQ6 195 aa9.02□□□□□ -0.97
CHKB-210ENST00000484266 KRTAP5-8O75690 187 aa8.72□□□□□ -1.01
CHKB-210ENST00000484266 OBSCNQ5VST9 7968 aa8.69□□□□□ -1.02
CHKB-210ENST00000484266 H3BS24 57 aa8.64□□□□□ -1.03
CHKB-210ENST00000484266 NDUFAF8A1L188 74 aa8.54□□□□□ -1.04
CHKB-210ENST00000484266 LUZP6Q538Z0 58 aa8.44□□□□□ -1.06
CHKB-210ENST00000484266 KRTAP5-1Q6L8H4 278 aa8.39□□□□□ -1.07
CHKB-210ENST00000484266 LCE1EQ5T753 118 aa8.22□□□□□ -1.09
CHKB-210ENST00000484266 KRTAP9-9Q9BYP9 154 aa8.12□□□□□ -1.11
CHKB-210ENST00000484266 MUC5ACP98088 5654 aa8.06□□□□□ -1.12
CHKB-210ENST00000484266 LCE3DQ9BYE3 92 aa7.93□□□□□ -1.14
CHKB-210ENST00000484266 MUC5BQ9HC84 5762 aaPredicted RBP7.9□□□□□ -1.15
CHKB-210ENST00000484266 A0A0A0MQY5 61 aa7.86□□□□□ -1.15
CHKB-210ENST00000484266 KRTAP4-2Q9BYR5 136 aa7.75□□□□□ -1.17
CHKB-210ENST00000484266 AHNAKQ09666 5890 aaKnown RBP7.73□□□□□ -1.17
CHKB-210ENST00000484266 LCE1BQ5T7P3 118 aa7.69□□□□□ -1.18
CHKB-210ENST00000484266 LCE1CQ5T751 118 aa7.64□□□□□ -1.19
CHKB-210ENST00000484266 LCE3EQ5T5B0 92 aa7.55□□□□□ -1.2
CHKB-210ENST00000484266 INE1O15225 51 aa7.25□□□□□ -1.25
CHKB-210ENST00000484266 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.04□□□□□ -1.28
CHKB-210ENST00000484266 KRTAP5-11Q6L8G4 156 aa6.88□□□□□ -1.31
CHKB-210ENST00000484266 KRTAP4-12Q9BQ66 201 aa6.78□□□□□ -1.32
CHKB-210ENST00000484266 KRTAP21-2Q3LI59 83 aa6.54□□□□□ -1.36
CHKB-210ENST00000484266 LCE1FQ5T754 118 aa6.53□□□□□ -1.36
CHKB-210ENST00000484266 PRM1P04553 51 aa6.01□□□□□ -1.45
CHKB-210ENST00000484266 PHGR1C9JFL3 82 aa5.92□□□□□ -1.46
CHKB-210ENST00000484266 KRTAP4-4Q9BYR3 166 aa5.89□□□□□ -1.47
CHKB-210ENST00000484266 MUC19Q7Z5P9 8384 aa5.31□□□□□ -1.56
CHKB-210ENST00000484266 KRTAP21-1Q3LI58 79 aa4.17□□□□□ -1.74
CHKB-210ENST00000484266 MUC16Q8WXI7 14507 aa3.84□□□□□ -1.79
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms