RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
SEMA3D-204ENST00000484038 LOC101927531A0A1B0GV80 90 aa2.59□□□□□ -1.99
SEMA3D-204ENST00000484038 COA5Q86WW8 74 aa2.59□□□□□ -1.99
SEMA3D-204ENST00000484038 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
SEMA3D-204ENST00000484038 Q1T7F1 81 aa2.57□□□□□ -2
SEMA3D-204ENST00000484038 SPRR2DP22532 72 aa2.56□□□□□ -2
SEMA3D-204ENST00000484038 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
SEMA3D-204ENST00000484038 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
SEMA3D-204ENST00000484038 PRR15LQ9BU68 103 aa2.54□□□□□ -2
SEMA3D-204ENST00000484038 CRIPTQ9P021 101 aa2.53□□□□□ -2
SEMA3D-204ENST00000484038 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
SEMA3D-204ENST00000484038 ACYP2P14621 99 aa2.52□□□□□ -2.01
SEMA3D-204ENST00000484038 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
SEMA3D-204ENST00000484038 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
SEMA3D-204ENST00000484038 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
SEMA3D-204ENST00000484038 MT1XP80297 61 aa2.5□□□□□ -2.01
SEMA3D-204ENST00000484038 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
SEMA3D-204ENST00000484038 A6NED7 52 aa2.47□□□□□ -2.01
SEMA3D-204ENST00000484038 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
SEMA3D-204ENST00000484038 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
SEMA3D-204ENST00000484038 CDC42SE1Q9NRR8 79 aa2.45□□□□□ -2.02
SEMA3D-204ENST00000484038 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
SEMA3D-204ENST00000484038 A0A1B0GU69 56 aa2.44□□□□□ -2.02
SEMA3D-204ENST00000484038 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SEMA3D-204ENST00000484038 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SEMA3D-204ENST00000484038 ADM2Q7Z4H4 148 aa2.43□□□□□ -2.02
SEMA3D-204ENST00000484038 H0YAA0 97 aa2.42□□□□□ -2.02
SEMA3D-204ENST00000484038 SPTSSBQ8NFR3 76 aa2.42□□□□□ -2.02
SEMA3D-204ENST00000484038 ROMO1P60602 79 aa2.41□□□□□ -2.02
SEMA3D-204ENST00000484038 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
SEMA3D-204ENST00000484038 R4GN34 69 aa2.39□□□□□ -2.03
SEMA3D-204ENST00000484038 K7ERS5 55 aa2.38□□□□□ -2.03
SEMA3D-204ENST00000484038 M0QZ58 72 aa2.37□□□□□ -2.03
SEMA3D-204ENST00000484038 UQCR11O14957 56 aa2.37□□□□□ -2.03
SEMA3D-204ENST00000484038 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
SEMA3D-204ENST00000484038 SPATA8Q6RVD6 105 aa2.36□□□□□ -2.03
SEMA3D-204ENST00000484038 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SEMA3D-204ENST00000484038 CAMK2N1Q7Z7J9 78 aa2.35□□□□□ -2.03
SEMA3D-204ENST00000484038 P0C880 135 aa2.34□□□□□ -2.03
SEMA3D-204ENST00000484038 A0A1B0GU33 70 aa2.32□□□□□ -2.04
SEMA3D-204ENST00000484038 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
SEMA3D-204ENST00000484038 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
SEMA3D-204ENST00000484038 A0A0D9SG42 100 aa2.26□□□□□ -2.05
SEMA3D-204ENST00000484038 MT4P47944 62 aa2.26□□□□□ -2.05
SEMA3D-204ENST00000484038 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
SEMA3D-204ENST00000484038 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
SEMA3D-204ENST00000484038 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
SEMA3D-204ENST00000484038 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
SEMA3D-204ENST00000484038 MT1EP04732 61 aa2.22□□□□□ -2.05
SEMA3D-204ENST00000484038 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
SEMA3D-204ENST00000484038 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
SEMA3D-204ENST00000484038 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
SEMA3D-204ENST00000484038 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
SEMA3D-204ENST00000484038 MT1GP13640 62 aa2.16□□□□□ -2.06
SEMA3D-204ENST00000484038 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
SEMA3D-204ENST00000484038 KRTAP19-5Q3LI72 72 aa2.14□□□□□ -2.07
SEMA3D-204ENST00000484038 MT1MQ8N339 61 aa2.13□□□□□ -2.07
SEMA3D-204ENST00000484038 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
SEMA3D-204ENST00000484038 MT1LQ93083 61 aa2.09□□□□□ -2.07
SEMA3D-204ENST00000484038 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
SEMA3D-204ENST00000484038 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
SEMA3D-204ENST00000484038 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SEMA3D-204ENST00000484038 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
SEMA3D-204ENST00000484038 TNP1P09430 55 aa1.94□□□□□ -2.1
SEMA3D-204ENST00000484038 INE1O15225 51 aa1.93□□□□□ -2.1
SEMA3D-204ENST00000484038 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
SEMA3D-204ENST00000484038 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
SEMA3D-204ENST00000484038 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SEMA3D-204ENST00000484038 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
SEMA3D-204ENST00000484038 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
SEMA3D-204ENST00000484038 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
SEMA3D-204ENST00000484038 MT1AP04731 61 aa1.77□□□□□ -2.13
SEMA3D-204ENST00000484038 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
SEMA3D-204ENST00000484038 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
SEMA3D-204ENST00000484038 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
SEMA3D-204ENST00000484038 PRM1P04553 51 aa1.16□□□□□ -2.22
SEMA3D-204ENST00000484038 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
SEMA3D-204ENST00000484038 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 34.8 ms