RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LCE1AQ5T7P2 110 aa5.44□□□□□ -1.54
SMAD9-204ENST00000483941 SPRR2DP22532 72 aa5.42□□□□□ -1.54
SMAD9-204ENST00000483941 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
SMAD9-204ENST00000483941 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
SMAD9-204ENST00000483941 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
SMAD9-204ENST00000483941 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
SMAD9-204ENST00000483941 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
SMAD9-204ENST00000483941 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
SMAD9-204ENST00000483941 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
SMAD9-204ENST00000483941 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
SMAD9-204ENST00000483941 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
SMAD9-204ENST00000483941 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
SMAD9-204ENST00000483941 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
SMAD9-204ENST00000483941 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
SMAD9-204ENST00000483941 MT1EP04732 61 aa5.09□□□□□ -1.59
SMAD9-204ENST00000483941 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
SMAD9-204ENST00000483941 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
SMAD9-204ENST00000483941 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
SMAD9-204ENST00000483941 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
SMAD9-204ENST00000483941 MT1LQ93083 61 aa4.97□□□□□ -1.61
SMAD9-204ENST00000483941 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
SMAD9-204ENST00000483941 MT1GP13640 62 aa4.94□□□□□ -1.62
SMAD9-204ENST00000483941 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
SMAD9-204ENST00000483941 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
SMAD9-204ENST00000483941 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
SMAD9-204ENST00000483941 MT1MQ8N339 61 aa4.8□□□□□ -1.64
SMAD9-204ENST00000483941 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
SMAD9-204ENST00000483941 MT4P47944 62 aa4.78□□□□□ -1.64
SMAD9-204ENST00000483941 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
SMAD9-204ENST00000483941 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
SMAD9-204ENST00000483941 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
SMAD9-204ENST00000483941 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
SMAD9-204ENST00000483941 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
SMAD9-204ENST00000483941 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
SMAD9-204ENST00000483941 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
SMAD9-204ENST00000483941 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
SMAD9-204ENST00000483941 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
SMAD9-204ENST00000483941 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
SMAD9-204ENST00000483941 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
SMAD9-204ENST00000483941 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
SMAD9-204ENST00000483941 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
SMAD9-204ENST00000483941 MT1AP04731 61 aa4.26□□□□□ -1.73
SMAD9-204ENST00000483941 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
SMAD9-204ENST00000483941 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
SMAD9-204ENST00000483941 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SMAD9-204ENST00000483941 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
SMAD9-204ENST00000483941 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
SMAD9-204ENST00000483941 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
SMAD9-204ENST00000483941 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
SMAD9-204ENST00000483941 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SMAD9-204ENST00000483941 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
SMAD9-204ENST00000483941 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
SMAD9-204ENST00000483941 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
SMAD9-204ENST00000483941 MT3P25713 68 aa3.92□□□□□ -1.78
SMAD9-204ENST00000483941 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
SMAD9-204ENST00000483941 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SMAD9-204ENST00000483941 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
SMAD9-204ENST00000483941 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
SMAD9-204ENST00000483941 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
SMAD9-204ENST00000483941 INE1O15225 51 aa3.62□□□□□ -1.83
SMAD9-204ENST00000483941 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
SMAD9-204ENST00000483941 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SMAD9-204ENST00000483941 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
SMAD9-204ENST00000483941 H3BS24 57 aa3.42□□□□□ -1.86
SMAD9-204ENST00000483941 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
SMAD9-204ENST00000483941 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
SMAD9-204ENST00000483941 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
SMAD9-204ENST00000483941 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
SMAD9-204ENST00000483941 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
SMAD9-204ENST00000483941 PRM1P04553 51 aa2.96□□□□□ -1.94
SMAD9-204ENST00000483941 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
SMAD9-204ENST00000483941 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SMAD9-204ENST00000483941 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
SMAD9-204ENST00000483941 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
SMAD9-204ENST00000483941 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SMAD9-204ENST00000483941 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SMAD9-204ENST00000483941 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SMAD9-204ENST00000483941 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms