RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 Q1T7F1 81 aa5□□□□□ -1.61
SSR1-208ENST00000483409 MT1EP04732 61 aa4.98□□□□□ -1.61
SSR1-208ENST00000483409 TNP1P09430 55 aa4.98□□□□□ -1.61
SSR1-208ENST00000483409 PCP4P48539 62 aa4.96□□□□□ -1.62
SSR1-208ENST00000483409 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
SSR1-208ENST00000483409 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
SSR1-208ENST00000483409 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
SSR1-208ENST00000483409 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.63
SSR1-208ENST00000483409 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
SSR1-208ENST00000483409 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.63
SSR1-208ENST00000483409 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
SSR1-208ENST00000483409 K7ERS5 55 aa4.87□□□□□ -1.63
SSR1-208ENST00000483409 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
SSR1-208ENST00000483409 A6NED7 52 aa4.84□□□□□ -1.63
SSR1-208ENST00000483409 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
SSR1-208ENST00000483409 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
SSR1-208ENST00000483409 MT1GP13640 62 aa4.78□□□□□ -1.64
SSR1-208ENST00000483409 MT1LQ93083 61 aa4.78□□□□□ -1.64
SSR1-208ENST00000483409 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
SSR1-208ENST00000483409 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
SSR1-208ENST00000483409 MT1MQ8N339 61 aa4.73□□□□□ -1.65
SSR1-208ENST00000483409 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
SSR1-208ENST00000483409 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
SSR1-208ENST00000483409 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
SSR1-208ENST00000483409 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
SSR1-208ENST00000483409 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
SSR1-208ENST00000483409 ROMO1P60602 79 aa4.57□□□□□ -1.68
SSR1-208ENST00000483409 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
SSR1-208ENST00000483409 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
SSR1-208ENST00000483409 MT4P47944 62 aa4.42□□□□□ -1.7
SSR1-208ENST00000483409 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
SSR1-208ENST00000483409 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
SSR1-208ENST00000483409 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
SSR1-208ENST00000483409 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
SSR1-208ENST00000483409 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SSR1-208ENST00000483409 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
SSR1-208ENST00000483409 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
SSR1-208ENST00000483409 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
SSR1-208ENST00000483409 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
SSR1-208ENST00000483409 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
SSR1-208ENST00000483409 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SSR1-208ENST00000483409 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
SSR1-208ENST00000483409 MT1AP04731 61 aa4.06□□□□□ -1.76
SSR1-208ENST00000483409 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
SSR1-208ENST00000483409 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
SSR1-208ENST00000483409 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
SSR1-208ENST00000483409 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
SSR1-208ENST00000483409 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
SSR1-208ENST00000483409 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
SSR1-208ENST00000483409 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
SSR1-208ENST00000483409 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SSR1-208ENST00000483409 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
SSR1-208ENST00000483409 MT3P25713 68 aa3.7□□□□□ -1.82
SSR1-208ENST00000483409 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
SSR1-208ENST00000483409 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
SSR1-208ENST00000483409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
SSR1-208ENST00000483409 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
SSR1-208ENST00000483409 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
SSR1-208ENST00000483409 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SSR1-208ENST00000483409 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
SSR1-208ENST00000483409 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
SSR1-208ENST00000483409 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
SSR1-208ENST00000483409 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
SSR1-208ENST00000483409 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
SSR1-208ENST00000483409 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
SSR1-208ENST00000483409 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SSR1-208ENST00000483409 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
SSR1-208ENST00000483409 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
SSR1-208ENST00000483409 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
SSR1-208ENST00000483409 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SSR1-208ENST00000483409 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
SSR1-208ENST00000483409 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
SSR1-208ENST00000483409 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
SSR1-208ENST00000483409 PRM1P04553 51 aa2.36□□□□□ -2.03
SSR1-208ENST00000483409 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SSR1-208ENST00000483409 INE1O15225 51 aa2.18□□□□□ -2.06
SSR1-208ENST00000483409 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
SSR1-208ENST00000483409 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms