RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
COL2A1-206ENST00000483376 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
COL2A1-206ENST00000483376 MT1GP13640 62 aa5.86□□□□□ -1.47
COL2A1-206ENST00000483376 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
COL2A1-206ENST00000483376 MT1LQ93083 61 aa5.82□□□□□ -1.48
COL2A1-206ENST00000483376 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
COL2A1-206ENST00000483376 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
COL2A1-206ENST00000483376 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
COL2A1-206ENST00000483376 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
COL2A1-206ENST00000483376 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
COL2A1-206ENST00000483376 MT1MQ8N339 61 aa5.73□□□□□ -1.49
COL2A1-206ENST00000483376 ROMO1P60602 79 aa5.67□□□□□ -1.5
COL2A1-206ENST00000483376 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
COL2A1-206ENST00000483376 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
COL2A1-206ENST00000483376 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
COL2A1-206ENST00000483376 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
COL2A1-206ENST00000483376 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
COL2A1-206ENST00000483376 KRTAP5-4Q6L8H1 288 aa5.38□□□□□ -1.55
COL2A1-206ENST00000483376 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
COL2A1-206ENST00000483376 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
COL2A1-206ENST00000483376 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
COL2A1-206ENST00000483376 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
COL2A1-206ENST00000483376 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
COL2A1-206ENST00000483376 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
COL2A1-206ENST00000483376 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
COL2A1-206ENST00000483376 MT4P47944 62 aa5.22□□□□□ -1.57
COL2A1-206ENST00000483376 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
COL2A1-206ENST00000483376 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
COL2A1-206ENST00000483376 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
COL2A1-206ENST00000483376 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
COL2A1-206ENST00000483376 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
COL2A1-206ENST00000483376 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
COL2A1-206ENST00000483376 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
COL2A1-206ENST00000483376 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
COL2A1-206ENST00000483376 AHNAK2Q8IVF2 5795 aa4.99□□□□□ -1.61
COL2A1-206ENST00000483376 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
COL2A1-206ENST00000483376 MT1AP04731 61 aa4.97□□□□□ -1.61
COL2A1-206ENST00000483376 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
COL2A1-206ENST00000483376 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
COL2A1-206ENST00000483376 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
COL2A1-206ENST00000483376 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
COL2A1-206ENST00000483376 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
COL2A1-206ENST00000483376 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
COL2A1-206ENST00000483376 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
COL2A1-206ENST00000483376 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
COL2A1-206ENST00000483376 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
COL2A1-206ENST00000483376 MT3P25713 68 aa4.53□□□□□ -1.68
COL2A1-206ENST00000483376 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
COL2A1-206ENST00000483376 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
COL2A1-206ENST00000483376 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
COL2A1-206ENST00000483376 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
COL2A1-206ENST00000483376 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
COL2A1-206ENST00000483376 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
COL2A1-206ENST00000483376 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
COL2A1-206ENST00000483376 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
COL2A1-206ENST00000483376 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.76
COL2A1-206ENST00000483376 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
COL2A1-206ENST00000483376 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
COL2A1-206ENST00000483376 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
COL2A1-206ENST00000483376 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
COL2A1-206ENST00000483376 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
COL2A1-206ENST00000483376 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
COL2A1-206ENST00000483376 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
COL2A1-206ENST00000483376 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
COL2A1-206ENST00000483376 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
COL2A1-206ENST00000483376 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
COL2A1-206ENST00000483376 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
COL2A1-206ENST00000483376 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
COL2A1-206ENST00000483376 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
COL2A1-206ENST00000483376 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
COL2A1-206ENST00000483376 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
COL2A1-206ENST00000483376 INE1O15225 51 aa2.93□□□□□ -1.94
COL2A1-206ENST00000483376 PRM1P04553 51 aa2.88□□□□□ -1.95
COL2A1-206ENST00000483376 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
COL2A1-206ENST00000483376 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
COL2A1-206ENST00000483376 H3BS24 57 aa2.62□□□□□ -1.99
COL2A1-206ENST00000483376 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
COL2A1-206ENST00000483376 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 62.8 ms