RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 LCE3AQ5TA76 89 aa5□□□□□ -1.61
SHANK1-207ENST00000483128 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
SHANK1-207ENST00000483128 TNP1P09430 55 aa4.99□□□□□ -1.61
SHANK1-207ENST00000483128 MT1MQ8N339 61 aa4.99□□□□□ -1.61
SHANK1-207ENST00000483128 MT1LQ93083 61 aa4.99□□□□□ -1.61
SHANK1-207ENST00000483128 UQCR11O14957 56 aa4.98□□□□□ -1.61
SHANK1-207ENST00000483128 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
SHANK1-207ENST00000483128 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SHANK1-207ENST00000483128 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
SHANK1-207ENST00000483128 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
SHANK1-207ENST00000483128 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
SHANK1-207ENST00000483128 A6NED7 52 aa4.89□□□□□ -1.63
SHANK1-207ENST00000483128 MT4P47944 62 aa4.88□□□□□ -1.63
SHANK1-207ENST00000483128 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
SHANK1-207ENST00000483128 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
SHANK1-207ENST00000483128 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
SHANK1-207ENST00000483128 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
SHANK1-207ENST00000483128 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
SHANK1-207ENST00000483128 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
SHANK1-207ENST00000483128 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
SHANK1-207ENST00000483128 K7ERS5 55 aa4.75□□□□□ -1.65
SHANK1-207ENST00000483128 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
SHANK1-207ENST00000483128 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
SHANK1-207ENST00000483128 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
SHANK1-207ENST00000483128 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
SHANK1-207ENST00000483128 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
SHANK1-207ENST00000483128 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
SHANK1-207ENST00000483128 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
SHANK1-207ENST00000483128 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
SHANK1-207ENST00000483128 ROMO1P60602 79 aa4.49□□□□□ -1.69
SHANK1-207ENST00000483128 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
SHANK1-207ENST00000483128 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
SHANK1-207ENST00000483128 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
SHANK1-207ENST00000483128 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
SHANK1-207ENST00000483128 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
SHANK1-207ENST00000483128 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
SHANK1-207ENST00000483128 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
SHANK1-207ENST00000483128 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
SHANK1-207ENST00000483128 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
SHANK1-207ENST00000483128 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
SHANK1-207ENST00000483128 MT1AP04731 61 aa4.24□□□□□ -1.73
SHANK1-207ENST00000483128 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
SHANK1-207ENST00000483128 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
SHANK1-207ENST00000483128 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
SHANK1-207ENST00000483128 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
SHANK1-207ENST00000483128 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
SHANK1-207ENST00000483128 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
SHANK1-207ENST00000483128 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
SHANK1-207ENST00000483128 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
SHANK1-207ENST00000483128 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
SHANK1-207ENST00000483128 MT3P25713 68 aa3.88□□□□□ -1.79
SHANK1-207ENST00000483128 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.8
SHANK1-207ENST00000483128 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
SHANK1-207ENST00000483128 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
SHANK1-207ENST00000483128 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
SHANK1-207ENST00000483128 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SHANK1-207ENST00000483128 H3BS24 57 aa3.55□□□□□ -1.84
SHANK1-207ENST00000483128 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
SHANK1-207ENST00000483128 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SHANK1-207ENST00000483128 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
SHANK1-207ENST00000483128 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
SHANK1-207ENST00000483128 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
SHANK1-207ENST00000483128 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SHANK1-207ENST00000483128 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
SHANK1-207ENST00000483128 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SHANK1-207ENST00000483128 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
SHANK1-207ENST00000483128 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
SHANK1-207ENST00000483128 INE1O15225 51 aa2.98□□□□□ -1.93
SHANK1-207ENST00000483128 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
SHANK1-207ENST00000483128 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
SHANK1-207ENST00000483128 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
SHANK1-207ENST00000483128 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SHANK1-207ENST00000483128 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SHANK1-207ENST00000483128 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
SHANK1-207ENST00000483128 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SHANK1-207ENST00000483128 PRM1P04553 51 aa2.32□□□□□ -2.04
SHANK1-207ENST00000483128 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
SHANK1-207ENST00000483128 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 39.3 ms