RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 KMT2DO14686 5537 aa5.36□□□□□ -1.55
COL21A1-209ENST00000482933 P0C880 135 aa5.36□□□□□ -1.55
COL21A1-209ENST00000482933 MT1XP80297 61 aa5.36□□□□□ -1.55
COL21A1-209ENST00000482933 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
COL21A1-209ENST00000482933 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
COL21A1-209ENST00000482933 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
COL21A1-209ENST00000482933 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
COL21A1-209ENST00000482933 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
COL21A1-209ENST00000482933 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
COL21A1-209ENST00000482933 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
COL21A1-209ENST00000482933 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
COL21A1-209ENST00000482933 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
COL21A1-209ENST00000482933 A0A0D9SG42 100 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 SPRR2EP22531 72 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 SPRR2BP35325 72 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 SPRR2AP35326 72 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
COL21A1-209ENST00000482933 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
COL21A1-209ENST00000482933 ROMO1P60602 79 aa5.18□□□□□ -1.58
COL21A1-209ENST00000482933 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
COL21A1-209ENST00000482933 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
COL21A1-209ENST00000482933 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
COL21A1-209ENST00000482933 KRTAP4-4Q9BYR3 166 aa5.08□□□□□ -1.6
COL21A1-209ENST00000482933 SPRR2DP22532 72 aa5.06□□□□□ -1.6
COL21A1-209ENST00000482933 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
COL21A1-209ENST00000482933 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
COL21A1-209ENST00000482933 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
COL21A1-209ENST00000482933 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
COL21A1-209ENST00000482933 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
COL21A1-209ENST00000482933 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
COL21A1-209ENST00000482933 TNP1P09430 55 aa4.8□□□□□ -1.64
COL21A1-209ENST00000482933 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
COL21A1-209ENST00000482933 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
COL21A1-209ENST00000482933 MT1EP04732 61 aa4.76□□□□□ -1.65
COL21A1-209ENST00000482933 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
COL21A1-209ENST00000482933 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
COL21A1-209ENST00000482933 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
COL21A1-209ENST00000482933 NDUFAF8A1L188 74 aa4.65□□□□□ -1.66
COL21A1-209ENST00000482933 MT1GP13640 62 aa4.65□□□□□ -1.66
COL21A1-209ENST00000482933 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.66
COL21A1-209ENST00000482933 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
COL21A1-209ENST00000482933 MT1MQ8N339 61 aa4.54□□□□□ -1.68
COL21A1-209ENST00000482933 MT1LQ93083 61 aa4.54□□□□□ -1.68
COL21A1-209ENST00000482933 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
COL21A1-209ENST00000482933 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
COL21A1-209ENST00000482933 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
COL21A1-209ENST00000482933 MT4P47944 62 aa4.42□□□□□ -1.7
COL21A1-209ENST00000482933 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
COL21A1-209ENST00000482933 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
COL21A1-209ENST00000482933 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
COL21A1-209ENST00000482933 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
COL21A1-209ENST00000482933 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
COL21A1-209ENST00000482933 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
COL21A1-209ENST00000482933 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
COL21A1-209ENST00000482933 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
COL21A1-209ENST00000482933 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
COL21A1-209ENST00000482933 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
COL21A1-209ENST00000482933 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
COL21A1-209ENST00000482933 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
COL21A1-209ENST00000482933 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
COL21A1-209ENST00000482933 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
COL21A1-209ENST00000482933 MT1AP04731 61 aa3.87□□□□□ -1.79
COL21A1-209ENST00000482933 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
COL21A1-209ENST00000482933 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
COL21A1-209ENST00000482933 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
COL21A1-209ENST00000482933 INE1O15225 51 aa3.64□□□□□ -1.83
COL21A1-209ENST00000482933 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
COL21A1-209ENST00000482933 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
COL21A1-209ENST00000482933 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
COL21A1-209ENST00000482933 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
COL21A1-209ENST00000482933 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
COL21A1-209ENST00000482933 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
COL21A1-209ENST00000482933 PRM1P04553 51 aa2.64□□□□□ -1.99
COL21A1-209ENST00000482933 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
COL21A1-209ENST00000482933 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
COL21A1-209ENST00000482933 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 58.4 ms