RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
NELFCD-208ENST00000482747 UQCR11O14957 56 aa6.26□□□□□ -1.41
NELFCD-208ENST00000482747 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
NELFCD-208ENST00000482747 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
NELFCD-208ENST00000482747 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
NELFCD-208ENST00000482747 TNP1P09430 55 aa6.2□□□□□ -1.42
NELFCD-208ENST00000482747 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
NELFCD-208ENST00000482747 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
NELFCD-208ENST00000482747 MT1GP13640 62 aa6.06□□□□□ -1.44
NELFCD-208ENST00000482747 MT1LQ93083 61 aa6.06□□□□□ -1.44
NELFCD-208ENST00000482747 MT1MQ8N339 61 aa6□□□□□ -1.45
NELFCD-208ENST00000482747 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
NELFCD-208ENST00000482747 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.45
NELFCD-208ENST00000482747 K7ERS5 55 aa5.95□□□□□ -1.46
NELFCD-208ENST00000482747 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
NELFCD-208ENST00000482747 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
NELFCD-208ENST00000482747 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
NELFCD-208ENST00000482747 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
NELFCD-208ENST00000482747 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
NELFCD-208ENST00000482747 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
NELFCD-208ENST00000482747 MT4P47944 62 aa5.71□□□□□ -1.5
NELFCD-208ENST00000482747 H3BS24 57 aa5.66□□□□□ -1.5
NELFCD-208ENST00000482747 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
NELFCD-208ENST00000482747 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
NELFCD-208ENST00000482747 ROMO1P60602 79 aa5.62□□□□□ -1.51
NELFCD-208ENST00000482747 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
NELFCD-208ENST00000482747 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
NELFCD-208ENST00000482747 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
NELFCD-208ENST00000482747 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
NELFCD-208ENST00000482747 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
NELFCD-208ENST00000482747 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
NELFCD-208ENST00000482747 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
NELFCD-208ENST00000482747 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
NELFCD-208ENST00000482747 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
NELFCD-208ENST00000482747 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
NELFCD-208ENST00000482747 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
NELFCD-208ENST00000482747 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
NELFCD-208ENST00000482747 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
NELFCD-208ENST00000482747 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
NELFCD-208ENST00000482747 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
NELFCD-208ENST00000482747 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
NELFCD-208ENST00000482747 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.58
NELFCD-208ENST00000482747 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.58
NELFCD-208ENST00000482747 MT1AP04731 61 aa5.12□□□□□ -1.59
NELFCD-208ENST00000482747 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
NELFCD-208ENST00000482747 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
NELFCD-208ENST00000482747 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
NELFCD-208ENST00000482747 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
NELFCD-208ENST00000482747 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
NELFCD-208ENST00000482747 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
NELFCD-208ENST00000482747 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
NELFCD-208ENST00000482747 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
NELFCD-208ENST00000482747 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
NELFCD-208ENST00000482747 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
NELFCD-208ENST00000482747 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
NELFCD-208ENST00000482747 MT3P25713 68 aa4.67□□□□□ -1.66
NELFCD-208ENST00000482747 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
NELFCD-208ENST00000482747 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
NELFCD-208ENST00000482747 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
NELFCD-208ENST00000482747 INE1O15225 51 aa4.36□□□□□ -1.71
NELFCD-208ENST00000482747 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
NELFCD-208ENST00000482747 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
NELFCD-208ENST00000482747 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
NELFCD-208ENST00000482747 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
NELFCD-208ENST00000482747 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
NELFCD-208ENST00000482747 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
NELFCD-208ENST00000482747 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
NELFCD-208ENST00000482747 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
NELFCD-208ENST00000482747 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
NELFCD-208ENST00000482747 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
NELFCD-208ENST00000482747 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
NELFCD-208ENST00000482747 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
NELFCD-208ENST00000482747 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
NELFCD-208ENST00000482747 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
NELFCD-208ENST00000482747 PRM1P04553 51 aa2.92□□□□□ -1.94
NELFCD-208ENST00000482747 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
NELFCD-208ENST00000482747 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
NELFCD-208ENST00000482747 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms