RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
SF1-215ENST00000482693 MT1EP04732 61 aa6.2□□□□□ -1.42
SF1-215ENST00000482693 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
SF1-215ENST00000482693 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
SF1-215ENST00000482693 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
SF1-215ENST00000482693 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
SF1-215ENST00000482693 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
SF1-215ENST00000482693 SPRR2DP22532 72 aa6.17□□□□□ -1.42
SF1-215ENST00000482693 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
SF1-215ENST00000482693 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
SF1-215ENST00000482693 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
SF1-215ENST00000482693 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
SF1-215ENST00000482693 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
SF1-215ENST00000482693 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
SF1-215ENST00000482693 MT1GP13640 62 aa6.01□□□□□ -1.45
SF1-215ENST00000482693 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
SF1-215ENST00000482693 ROMO1P60602 79 aa5.99□□□□□ -1.45
SF1-215ENST00000482693 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
SF1-215ENST00000482693 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
SF1-215ENST00000482693 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
SF1-215ENST00000482693 MT1LQ93083 61 aa5.98□□□□□ -1.45
SF1-215ENST00000482693 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
SF1-215ENST00000482693 MT1MQ8N339 61 aa5.88□□□□□ -1.47
SF1-215ENST00000482693 H3BS24 57 aa5.84□□□□□ -1.47
SF1-215ENST00000482693 BRK1Q8WUW1 75 aa5.8□□□□□ -1.48
SF1-215ENST00000482693 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
SF1-215ENST00000482693 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
SF1-215ENST00000482693 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
SF1-215ENST00000482693 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
SF1-215ENST00000482693 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
SF1-215ENST00000482693 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
SF1-215ENST00000482693 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
SF1-215ENST00000482693 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
SF1-215ENST00000482693 MT4P47944 62 aa5.36□□□□□ -1.55
SF1-215ENST00000482693 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
SF1-215ENST00000482693 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
SF1-215ENST00000482693 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
SF1-215ENST00000482693 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
SF1-215ENST00000482693 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
SF1-215ENST00000482693 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
SF1-215ENST00000482693 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
SF1-215ENST00000482693 MT1AP04731 61 aa5.1□□□□□ -1.59
SF1-215ENST00000482693 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
SF1-215ENST00000482693 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
SF1-215ENST00000482693 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
SF1-215ENST00000482693 AHNAK2Q8IVF2 5795 aa4.96□□□□□ -1.62
SF1-215ENST00000482693 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
SF1-215ENST00000482693 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
SF1-215ENST00000482693 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
SF1-215ENST00000482693 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
SF1-215ENST00000482693 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SF1-215ENST00000482693 MT3P25713 68 aa4.67□□□□□ -1.66
SF1-215ENST00000482693 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
SF1-215ENST00000482693 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
SF1-215ENST00000482693 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
SF1-215ENST00000482693 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
SF1-215ENST00000482693 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
SF1-215ENST00000482693 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
SF1-215ENST00000482693 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
SF1-215ENST00000482693 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
SF1-215ENST00000482693 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
SF1-215ENST00000482693 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
SF1-215ENST00000482693 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
SF1-215ENST00000482693 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
SF1-215ENST00000482693 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
SF1-215ENST00000482693 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SF1-215ENST00000482693 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
SF1-215ENST00000482693 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
SF1-215ENST00000482693 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
SF1-215ENST00000482693 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
SF1-215ENST00000482693 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SF1-215ENST00000482693 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
SF1-215ENST00000482693 INE1O15225 51 aa3.11□□□□□ -1.91
SF1-215ENST00000482693 PRM1P04553 51 aa3.06□□□□□ -1.92
SF1-215ENST00000482693 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
SF1-215ENST00000482693 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SF1-215ENST00000482693 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SF1-215ENST00000482693 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms