RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CLK1-212ENST00000482590 NDUFB1O75438 58 aa2.98□□□□□ -1.93
CLK1-212ENST00000482590 SPINK7P58062 85 aa2.98□□□□□ -1.93
CLK1-212ENST00000482590 WFDC13Q8IUB5 93 aa2.98□□□□□ -1.93
CLK1-212ENST00000482590 A0A087WVE0 104 aa2.97□□□□□ -1.93
CLK1-212ENST00000482590 ATP5EP2Q5VTU8 51 aa2.97□□□□□ -1.93
CLK1-212ENST00000482590 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
CLK1-212ENST00000482590 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CLK1-212ENST00000482590 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
CLK1-212ENST00000482590 ACYP2P14621 99 aa2.9□□□□□ -1.95
CLK1-212ENST00000482590 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
CLK1-212ENST00000482590 H1FX-AS1Q4G0G2 97 aa2.9□□□□□ -1.95
CLK1-212ENST00000482590 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.95
CLK1-212ENST00000482590 ATXN8Q156A1 80 aa2.89□□□□□ -1.95
CLK1-212ENST00000482590 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
CLK1-212ENST00000482590 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
CLK1-212ENST00000482590 SPATA8Q6RVD6 105 aa2.88□□□□□ -1.95
CLK1-212ENST00000482590 H0Y9P7 68 aa2.87□□□□□ -1.95
CLK1-212ENST00000482590 NREPQ16612 68 aa2.87□□□□□ -1.95
CLK1-212ENST00000482590 NEBP20929 6669 aa2.86□□□□□ -1.95
CLK1-212ENST00000482590 K7EQZ3 153 aa2.85□□□□□ -1.95
CLK1-212ENST00000482590 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
CLK1-212ENST00000482590 S4R3F8 94 aa2.8□□□□□ -1.96
CLK1-212ENST00000482590 PLAC4Q8WY50 150 aa2.79□□□□□ -1.96
CLK1-212ENST00000482590 MT1BP07438 61 aa2.77□□□□□ -1.97
CLK1-212ENST00000482590 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
CLK1-212ENST00000482590 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
CLK1-212ENST00000482590 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
CLK1-212ENST00000482590 UBL5Q9BZL1 73 aa2.73□□□□□ -1.97
CLK1-212ENST00000482590 TP53AIP1Q9HCN2 124 aa2.7□□□□□ -1.98
CLK1-212ENST00000482590 KMT2DO14686 5537 aa2.7□□□□□ -1.98
CLK1-212ENST00000482590 A0A1B0GU69 56 aa2.69□□□□□ -1.98
CLK1-212ENST00000482590 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
CLK1-212ENST00000482590 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
CLK1-212ENST00000482590 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
CLK1-212ENST00000482590 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
CLK1-212ENST00000482590 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
CLK1-212ENST00000482590 SPRR2EP22531 72 aa2.63□□□□□ -1.99
CLK1-212ENST00000482590 SPRR2BP35325 72 aa2.63□□□□□ -1.99
CLK1-212ENST00000482590 SPRR2AP35326 72 aa2.63□□□□□ -1.99
CLK1-212ENST00000482590 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
CLK1-212ENST00000482590 H0YAA0 97 aa2.61□□□□□ -1.99
CLK1-212ENST00000482590 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
CLK1-212ENST00000482590 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
CLK1-212ENST00000482590 MT1XP80297 61 aa2.57□□□□□ -2
CLK1-212ENST00000482590 SPRR2DP22532 72 aa2.55□□□□□ -2
CLK1-212ENST00000482590 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
CLK1-212ENST00000482590 M0QZ58 72 aa2.54□□□□□ -2
CLK1-212ENST00000482590 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
CLK1-212ENST00000482590 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
CLK1-212ENST00000482590 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
CLK1-212ENST00000482590 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
CLK1-212ENST00000482590 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
CLK1-212ENST00000482590 MT1EP04732 61 aa2.29□□□□□ -2.04
CLK1-212ENST00000482590 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
CLK1-212ENST00000482590 A0A0D9SG42 100 aa2.25□□□□□ -2.05
CLK1-212ENST00000482590 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
CLK1-212ENST00000482590 MT1GP13640 62 aa2.24□□□□□ -2.05
CLK1-212ENST00000482590 MT4P47944 62 aa2.22□□□□□ -2.05
CLK1-212ENST00000482590 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
CLK1-212ENST00000482590 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
CLK1-212ENST00000482590 MT1MQ8N339 61 aa2.2□□□□□ -2.06
CLK1-212ENST00000482590 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
CLK1-212ENST00000482590 MT1LQ93083 61 aa2.17□□□□□ -2.06
CLK1-212ENST00000482590 TNP1P09430 55 aa2.13□□□□□ -2.07
CLK1-212ENST00000482590 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
CLK1-212ENST00000482590 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
CLK1-212ENST00000482590 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
CLK1-212ENST00000482590 MT1AP04731 61 aa1.85□□□□□ -2.11
CLK1-212ENST00000482590 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
CLK1-212ENST00000482590 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
CLK1-212ENST00000482590 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CLK1-212ENST00000482590 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
CLK1-212ENST00000482590 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
CLK1-212ENST00000482590 PRM1P04553 51 aa1.3□□□□□ -2.2
CLK1-212ENST00000482590 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CLK1-212ENST00000482590 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
CLK1-212ENST00000482590 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms