RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 MIR22HGQ0VDD5 57 aa7.27□□□□□ -1.25
CLIP2-205ENST00000482424 MT1GP13640 62 aa7.23□□□□□ -1.25
CLIP2-205ENST00000482424 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
CLIP2-205ENST00000482424 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
CLIP2-205ENST00000482424 MT1LQ93083 61 aa7.15□□□□□ -1.26
CLIP2-205ENST00000482424 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
CLIP2-205ENST00000482424 MT1MQ8N339 61 aa7.1□□□□□ -1.27
CLIP2-205ENST00000482424 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
CLIP2-205ENST00000482424 K7ERS5 55 aa6.97□□□□□ -1.29
CLIP2-205ENST00000482424 KRTAP12-3P60328 96 aa6.95□□□□□ -1.3
CLIP2-205ENST00000482424 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
CLIP2-205ENST00000482424 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
CLIP2-205ENST00000482424 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
CLIP2-205ENST00000482424 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
CLIP2-205ENST00000482424 PRO0628Q9UI54 55 aa6.8□□□□□ -1.32
CLIP2-205ENST00000482424 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
CLIP2-205ENST00000482424 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
CLIP2-205ENST00000482424 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
CLIP2-205ENST00000482424 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CLIP2-205ENST00000482424 MT4P47944 62 aa6.69□□□□□ -1.34
CLIP2-205ENST00000482424 GPR98Q8WXG9 6306 aa6.69□□□□□ -1.34
CLIP2-205ENST00000482424 HMCN1Q96RW7 5635 aa6.68□□□□□ -1.34
CLIP2-205ENST00000482424 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
CLIP2-205ENST00000482424 ROMO1P60602 79 aa6.66□□□□□ -1.34
CLIP2-205ENST00000482424 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
CLIP2-205ENST00000482424 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
CLIP2-205ENST00000482424 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
CLIP2-205ENST00000482424 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
CLIP2-205ENST00000482424 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
CLIP2-205ENST00000482424 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
CLIP2-205ENST00000482424 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.39
CLIP2-205ENST00000482424 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
CLIP2-205ENST00000482424 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
CLIP2-205ENST00000482424 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
CLIP2-205ENST00000482424 KRTAP12-4P60329 112 aa6.3□□□□□ -1.4
CLIP2-205ENST00000482424 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
CLIP2-205ENST00000482424 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
CLIP2-205ENST00000482424 SYNE1Q8NF91 8797 aaKnown RBP6.27□□□□□ -1.41
CLIP2-205ENST00000482424 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
CLIP2-205ENST00000482424 MT1AP04731 61 aa6.09□□□□□ -1.43
CLIP2-205ENST00000482424 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
CLIP2-205ENST00000482424 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
CLIP2-205ENST00000482424 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
CLIP2-205ENST00000482424 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
CLIP2-205ENST00000482424 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
CLIP2-205ENST00000482424 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
CLIP2-205ENST00000482424 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
CLIP2-205ENST00000482424 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
CLIP2-205ENST00000482424 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
CLIP2-205ENST00000482424 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
CLIP2-205ENST00000482424 MT3P25713 68 aa5.56□□□□□ -1.52
CLIP2-205ENST00000482424 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
CLIP2-205ENST00000482424 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
CLIP2-205ENST00000482424 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
CLIP2-205ENST00000482424 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
CLIP2-205ENST00000482424 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
CLIP2-205ENST00000482424 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
CLIP2-205ENST00000482424 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
CLIP2-205ENST00000482424 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
CLIP2-205ENST00000482424 H3BS24 57 aa4.94□□□□□ -1.62
CLIP2-205ENST00000482424 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
CLIP2-205ENST00000482424 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
CLIP2-205ENST00000482424 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
CLIP2-205ENST00000482424 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
CLIP2-205ENST00000482424 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
CLIP2-205ENST00000482424 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
CLIP2-205ENST00000482424 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
CLIP2-205ENST00000482424 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CLIP2-205ENST00000482424 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
CLIP2-205ENST00000482424 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
CLIP2-205ENST00000482424 INE1O15225 51 aa4.03□□□□□ -1.76
CLIP2-205ENST00000482424 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
CLIP2-205ENST00000482424 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
CLIP2-205ENST00000482424 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
CLIP2-205ENST00000482424 PRM1P04553 51 aa3.46□□□□□ -1.86
CLIP2-205ENST00000482424 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
CLIP2-205ENST00000482424 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
CLIP2-205ENST00000482424 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 45.9 ms