RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
DDR1-243ENST00000482050 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
DDR1-243ENST00000482050 MT1LQ93083 61 aa6.22□□□□□ -1.41
DDR1-243ENST00000482050 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
DDR1-243ENST00000482050 ROMO1P60602 79 aa6.21□□□□□ -1.42
DDR1-243ENST00000482050 MT1GP13640 62 aa6.19□□□□□ -1.42
DDR1-243ENST00000482050 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
DDR1-243ENST00000482050 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
DDR1-243ENST00000482050 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
DDR1-243ENST00000482050 MT1MQ8N339 61 aa6.12□□□□□ -1.43
DDR1-243ENST00000482050 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
DDR1-243ENST00000482050 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
DDR1-243ENST00000482050 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
DDR1-243ENST00000482050 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
DDR1-243ENST00000482050 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
DDR1-243ENST00000482050 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
DDR1-243ENST00000482050 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
DDR1-243ENST00000482050 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
DDR1-243ENST00000482050 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
DDR1-243ENST00000482050 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
DDR1-243ENST00000482050 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
DDR1-243ENST00000482050 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
DDR1-243ENST00000482050 MT4P47944 62 aa5.62□□□□□ -1.51
DDR1-243ENST00000482050 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
DDR1-243ENST00000482050 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
DDR1-243ENST00000482050 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
DDR1-243ENST00000482050 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
DDR1-243ENST00000482050 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
DDR1-243ENST00000482050 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
DDR1-243ENST00000482050 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
DDR1-243ENST00000482050 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
DDR1-243ENST00000482050 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
DDR1-243ENST00000482050 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
DDR1-243ENST00000482050 MT1AP04731 61 aa5.28□□□□□ -1.56
DDR1-243ENST00000482050 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
DDR1-243ENST00000482050 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
DDR1-243ENST00000482050 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
DDR1-243ENST00000482050 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
DDR1-243ENST00000482050 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
DDR1-243ENST00000482050 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
DDR1-243ENST00000482050 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
DDR1-243ENST00000482050 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
DDR1-243ENST00000482050 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
DDR1-243ENST00000482050 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
DDR1-243ENST00000482050 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
DDR1-243ENST00000482050 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
DDR1-243ENST00000482050 MT3P25713 68 aa4.82□□□□□ -1.64
DDR1-243ENST00000482050 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
DDR1-243ENST00000482050 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
DDR1-243ENST00000482050 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
DDR1-243ENST00000482050 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
DDR1-243ENST00000482050 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
DDR1-243ENST00000482050 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
DDR1-243ENST00000482050 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
DDR1-243ENST00000482050 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
DDR1-243ENST00000482050 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
DDR1-243ENST00000482050 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
DDR1-243ENST00000482050 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
DDR1-243ENST00000482050 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
DDR1-243ENST00000482050 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
DDR1-243ENST00000482050 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
DDR1-243ENST00000482050 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
DDR1-243ENST00000482050 LCE1CQ5T751 118 aa4□□□□□ -1.77
DDR1-243ENST00000482050 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
DDR1-243ENST00000482050 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
DDR1-243ENST00000482050 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
DDR1-243ENST00000482050 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
DDR1-243ENST00000482050 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
DDR1-243ENST00000482050 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
DDR1-243ENST00000482050 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
DDR1-243ENST00000482050 PRM1P04553 51 aa3.22□□□□□ -1.89
DDR1-243ENST00000482050 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
DDR1-243ENST00000482050 INE1O15225 51 aa3.16□□□□□ -1.9
DDR1-243ENST00000482050 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
DDR1-243ENST00000482050 H3BS24 57 aa2.91□□□□□ -1.94
DDR1-243ENST00000482050 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
DDR1-243ENST00000482050 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
DDR1-243ENST00000482050 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms