RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
SHISA4-203ENST00000481699 KRTAP19-5Q3LI72 72 aa8.6□□□□□ -1.03
SHISA4-203ENST00000481699 KRTAP19-7Q3SYF9 63 aa8.57□□□□□ -1.04
SHISA4-203ENST00000481699 PP632Q6XCG6 107 aa8.52□□□□□ -1.05
SHISA4-203ENST00000481699 MT1EP04732 61 aa8.49□□□□□ -1.05
SHISA4-203ENST00000481699 LCE1AQ5T7P2 110 aa8.49□□□□□ -1.05
SHISA4-203ENST00000481699 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
SHISA4-203ENST00000481699 SPRR2DP22532 72 aa8.45□□□□□ -1.06
SHISA4-203ENST00000481699 KRTAP19-3Q7Z4W3 81 aa8.29□□□□□ -1.08
SHISA4-203ENST00000481699 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
SHISA4-203ENST00000481699 MT1LQ93083 61 aa8.24□□□□□ -1.09
SHISA4-203ENST00000481699 GPR98Q8WXG9 6306 aa8.23□□□□□ -1.09
SHISA4-203ENST00000481699 MT1GP13640 62 aa8.19□□□□□ -1.1
SHISA4-203ENST00000481699 LCE5AQ5TCM9 118 aa8.18□□□□□ -1.1
SHISA4-203ENST00000481699 KRTAP15-1Q3LI76 137 aa8.15□□□□□ -1.1
SHISA4-203ENST00000481699 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
SHISA4-203ENST00000481699 KTN1-AS1Q86SY8 53 aa8.1□□□□□ -1.11
SHISA4-203ENST00000481699 MT1MQ8N339 61 aa8.04□□□□□ -1.12
SHISA4-203ENST00000481699 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
SHISA4-203ENST00000481699 KRTAP4-9Q9BYQ8 210 aa7.95□□□□□ -1.14
SHISA4-203ENST00000481699 DSTQ03001 7570 aaKnown RBP7.86□□□□□ -1.15
SHISA4-203ENST00000481699 KRTAP4-7Q9BYR0 210 aa7.86□□□□□ -1.15
SHISA4-203ENST00000481699 LCE3CQ5T5A8 94 aa7.84□□□□□ -1.15
SHISA4-203ENST00000481699 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
SHISA4-203ENST00000481699 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
SHISA4-203ENST00000481699 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
SHISA4-203ENST00000481699 HMCN1Q96RW7 5635 aa7.5□□□□□ -1.21
SHISA4-203ENST00000481699 MT4P47944 62 aa7.5□□□□□ -1.21
SHISA4-203ENST00000481699 AHNAK2Q8IVF2 5795 aa7.48□□□□□ -1.21
SHISA4-203ENST00000481699 KRTAP5-10Q6L8G5 202 aa7.42□□□□□ -1.22
SHISA4-203ENST00000481699 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
SHISA4-203ENST00000481699 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
SHISA4-203ENST00000481699 KRTAP9-6A8MVA2 160 aa7.3□□□□□ -1.24
SHISA4-203ENST00000481699 KRTAP5-5Q701N2 237 aaPredicted RBP7.25□□□□□ -1.25
SHISA4-203ENST00000481699 KRTAP5-7Q6L8G8 165 aa7.2□□□□□ -1.26
SHISA4-203ENST00000481699 KRTAP5-4Q6L8H1 288 aa7.2□□□□□ -1.26
SHISA4-203ENST00000481699 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
SHISA4-203ENST00000481699 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
SHISA4-203ENST00000481699 KRTAP5-3Q6L8H2 238 aa7.09□□□□□ -1.27
SHISA4-203ENST00000481699 MT1AP04731 61 aa7.03□□□□□ -1.28
SHISA4-203ENST00000481699 KRTAP12-4P60329 112 aa7.01□□□□□ -1.29
SHISA4-203ENST00000481699 KRTAP6-1Q3LI64 71 aa6.93□□□□□ -1.3
SHISA4-203ENST00000481699 LUZP6Q538Z0 58 aa6.86□□□□□ -1.31
SHISA4-203ENST00000481699 SYNE1Q8NF91 8797 aaKnown RBP6.84□□□□□ -1.31
SHISA4-203ENST00000481699 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
SHISA4-203ENST00000481699 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
SHISA4-203ENST00000481699 KRTAP6-2Q3LI66 62 aa6.51□□□□□ -1.37
SHISA4-203ENST00000481699 MT3P25713 68 aa6.44□□□□□ -1.38
SHISA4-203ENST00000481699 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
SHISA4-203ENST00000481699 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
SHISA4-203ENST00000481699 AHNAKQ09666 5890 aaKnown RBP6.29□□□□□ -1.4
SHISA4-203ENST00000481699 MUC5ACP98088 5654 aa6.27□□□□□ -1.41
SHISA4-203ENST00000481699 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
SHISA4-203ENST00000481699 KRTAP5-8O75690 187 aa6.21□□□□□ -1.42
SHISA4-203ENST00000481699 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
SHISA4-203ENST00000481699 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
SHISA4-203ENST00000481699 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.48
SHISA4-203ENST00000481699 LCE3DQ9BYE3 92 aa5.82□□□□□ -1.48
SHISA4-203ENST00000481699 LCE1EQ5T753 118 aa5.69□□□□□ -1.5
SHISA4-203ENST00000481699 KRTAP5-1Q6L8H4 278 aa5.63□□□□□ -1.51
SHISA4-203ENST00000481699 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
SHISA4-203ENST00000481699 LCE1BQ5T7P3 118 aa5.38□□□□□ -1.55
SHISA4-203ENST00000481699 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
SHISA4-203ENST00000481699 LCE1CQ5T751 118 aa5.28□□□□□ -1.56
SHISA4-203ENST00000481699 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
SHISA4-203ENST00000481699 INE1O15225 51 aa5.12□□□□□ -1.59
SHISA4-203ENST00000481699 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
SHISA4-203ENST00000481699 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
SHISA4-203ENST00000481699 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
SHISA4-203ENST00000481699 PRM1P04553 51 aa4.61□□□□□ -1.67
SHISA4-203ENST00000481699 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
SHISA4-203ENST00000481699 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
SHISA4-203ENST00000481699 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
SHISA4-203ENST00000481699 H3BS24 57 aa4.39□□□□□ -1.71
SHISA4-203ENST00000481699 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
SHISA4-203ENST00000481699 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SHISA4-203ENST00000481699 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
SHISA4-203ENST00000481699 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 55.7 ms