RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 K7ERS5 55 aa3.47□□□□□ -1.85
CLIP4-210ENST00000481628 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
CLIP4-210ENST00000481628 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
CLIP4-210ENST00000481628 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
CLIP4-210ENST00000481628 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
CLIP4-210ENST00000481628 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
CLIP4-210ENST00000481628 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
CLIP4-210ENST00000481628 A8MU10 97 aa3.43□□□□□ -1.86
CLIP4-210ENST00000481628 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
CLIP4-210ENST00000481628 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
CLIP4-210ENST00000481628 MT1EP04732 61 aa3.42□□□□□ -1.86
CLIP4-210ENST00000481628 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CLIP4-210ENST00000481628 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
CLIP4-210ENST00000481628 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
CLIP4-210ENST00000481628 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
CLIP4-210ENST00000481628 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
CLIP4-210ENST00000481628 MT1GP13640 62 aa3.32□□□□□ -1.88
CLIP4-210ENST00000481628 TNP1P09430 55 aa3.28□□□□□ -1.88
CLIP4-210ENST00000481628 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
CLIP4-210ENST00000481628 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
CLIP4-210ENST00000481628 BRK1Q8WUW1 75 aa3.28□□□□□ -1.88
CLIP4-210ENST00000481628 KRTAP25-1Q3LHN0 102 aa3.27□□□□□ -1.89
CLIP4-210ENST00000481628 MT1MQ8N339 61 aa3.26□□□□□ -1.89
CLIP4-210ENST00000481628 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
CLIP4-210ENST00000481628 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
CLIP4-210ENST00000481628 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
CLIP4-210ENST00000481628 MT4P47944 62 aa3.24□□□□□ -1.89
CLIP4-210ENST00000481628 MT1LQ93083 61 aa3.24□□□□□ -1.89
CLIP4-210ENST00000481628 ROMO1P60602 79 aa3.22□□□□□ -1.89
CLIP4-210ENST00000481628 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
CLIP4-210ENST00000481628 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
CLIP4-210ENST00000481628 PRO0628Q9UI54 55 aa3.18□□□□□ -1.9
CLIP4-210ENST00000481628 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
CLIP4-210ENST00000481628 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
CLIP4-210ENST00000481628 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
CLIP4-210ENST00000481628 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
CLIP4-210ENST00000481628 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CLIP4-210ENST00000481628 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
CLIP4-210ENST00000481628 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
CLIP4-210ENST00000481628 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
CLIP4-210ENST00000481628 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
CLIP4-210ENST00000481628 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
CLIP4-210ENST00000481628 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
CLIP4-210ENST00000481628 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
CLIP4-210ENST00000481628 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
CLIP4-210ENST00000481628 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
CLIP4-210ENST00000481628 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
CLIP4-210ENST00000481628 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
CLIP4-210ENST00000481628 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CLIP4-210ENST00000481628 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
CLIP4-210ENST00000481628 MT1AP04731 61 aa2.76□□□□□ -1.97
CLIP4-210ENST00000481628 MT3P25713 68 aa2.76□□□□□ -1.97
CLIP4-210ENST00000481628 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
CLIP4-210ENST00000481628 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CLIP4-210ENST00000481628 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
CLIP4-210ENST00000481628 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
CLIP4-210ENST00000481628 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
CLIP4-210ENST00000481628 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
CLIP4-210ENST00000481628 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
CLIP4-210ENST00000481628 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
CLIP4-210ENST00000481628 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
CLIP4-210ENST00000481628 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CLIP4-210ENST00000481628 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
CLIP4-210ENST00000481628 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
CLIP4-210ENST00000481628 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
CLIP4-210ENST00000481628 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CLIP4-210ENST00000481628 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CLIP4-210ENST00000481628 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
CLIP4-210ENST00000481628 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
CLIP4-210ENST00000481628 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CLIP4-210ENST00000481628 INE1O15225 51 aa1.93□□□□□ -2.1
CLIP4-210ENST00000481628 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CLIP4-210ENST00000481628 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
CLIP4-210ENST00000481628 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CLIP4-210ENST00000481628 PRM1P04553 51 aa1.61□□□□□ -2.15
CLIP4-210ENST00000481628 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CLIP4-210ENST00000481628 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
CLIP4-210ENST00000481628 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 51.6 ms