RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
SSBP1-210ENST00000481508 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
SSBP1-210ENST00000481508 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
SSBP1-210ENST00000481508 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
SSBP1-210ENST00000481508 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
SSBP1-210ENST00000481508 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
SSBP1-210ENST00000481508 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
SSBP1-210ENST00000481508 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
SSBP1-210ENST00000481508 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
SSBP1-210ENST00000481508 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
SSBP1-210ENST00000481508 MT3P25713 68 aa4.1□□□□□ -1.75
SSBP1-210ENST00000481508 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
SSBP1-210ENST00000481508 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
SSBP1-210ENST00000481508 UQCR11O14957 56 aa4.02□□□□□ -1.77
SSBP1-210ENST00000481508 PSPHP1O15172 72 aa4.02□□□□□ -1.77
SSBP1-210ENST00000481508 Q1T7F1 81 aa4.01□□□□□ -1.77
SSBP1-210ENST00000481508 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
SSBP1-210ENST00000481508 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
SSBP1-210ENST00000481508 V9GYY9 64 aa3.96□□□□□ -1.78
SSBP1-210ENST00000481508 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
SSBP1-210ENST00000481508 MT1EP04732 61 aa3.94□□□□□ -1.78
SSBP1-210ENST00000481508 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
SSBP1-210ENST00000481508 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
SSBP1-210ENST00000481508 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
SSBP1-210ENST00000481508 TNP1P09430 55 aa3.89□□□□□ -1.79
SSBP1-210ENST00000481508 A6NED7 52 aa3.85□□□□□ -1.79
SSBP1-210ENST00000481508 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
SSBP1-210ENST00000481508 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
SSBP1-210ENST00000481508 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
SSBP1-210ENST00000481508 MT4P47944 62 aa3.83□□□□□ -1.8
SSBP1-210ENST00000481508 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SSBP1-210ENST00000481508 MT1LQ93083 61 aa3.79□□□□□ -1.8
SSBP1-210ENST00000481508 K7ERS5 55 aa3.78□□□□□ -1.8
SSBP1-210ENST00000481508 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
SSBP1-210ENST00000481508 MT1GP13640 62 aa3.74□□□□□ -1.81
SSBP1-210ENST00000481508 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
SSBP1-210ENST00000481508 MT1MQ8N339 61 aa3.73□□□□□ -1.81
SSBP1-210ENST00000481508 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
SSBP1-210ENST00000481508 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SSBP1-210ENST00000481508 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
SSBP1-210ENST00000481508 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
SSBP1-210ENST00000481508 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
SSBP1-210ENST00000481508 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SSBP1-210ENST00000481508 ROMO1P60602 79 aa3.63□□□□□ -1.83
SSBP1-210ENST00000481508 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SSBP1-210ENST00000481508 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
SSBP1-210ENST00000481508 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
SSBP1-210ENST00000481508 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
SSBP1-210ENST00000481508 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
SSBP1-210ENST00000481508 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
SSBP1-210ENST00000481508 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
SSBP1-210ENST00000481508 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SSBP1-210ENST00000481508 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
SSBP1-210ENST00000481508 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SSBP1-210ENST00000481508 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SSBP1-210ENST00000481508 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
SSBP1-210ENST00000481508 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
SSBP1-210ENST00000481508 MT1AP04731 61 aa3.21□□□□□ -1.9
SSBP1-210ENST00000481508 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
SSBP1-210ENST00000481508 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
SSBP1-210ENST00000481508 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
SSBP1-210ENST00000481508 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
SSBP1-210ENST00000481508 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
SSBP1-210ENST00000481508 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SSBP1-210ENST00000481508 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
SSBP1-210ENST00000481508 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
SSBP1-210ENST00000481508 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
SSBP1-210ENST00000481508 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
SSBP1-210ENST00000481508 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SSBP1-210ENST00000481508 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
SSBP1-210ENST00000481508 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
SSBP1-210ENST00000481508 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SSBP1-210ENST00000481508 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
SSBP1-210ENST00000481508 INE1O15225 51 aa1.99□□□□□ -2.09
SSBP1-210ENST00000481508 PRM1P04553 51 aa1.89□□□□□ -2.11
SSBP1-210ENST00000481508 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
SSBP1-210ENST00000481508 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms