RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
RAPGEF1-207ENST00000481260 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
RAPGEF1-207ENST00000481260 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
RAPGEF1-207ENST00000481260 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
RAPGEF1-207ENST00000481260 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
RAPGEF1-207ENST00000481260 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
RAPGEF1-207ENST00000481260 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
RAPGEF1-207ENST00000481260 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
RAPGEF1-207ENST00000481260 SPRR2DP22532 72 aa4.37□□□□□ -1.71
RAPGEF1-207ENST00000481260 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
RAPGEF1-207ENST00000481260 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
RAPGEF1-207ENST00000481260 MT1EP04732 61 aa4.26□□□□□ -1.73
RAPGEF1-207ENST00000481260 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
RAPGEF1-207ENST00000481260 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
RAPGEF1-207ENST00000481260 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
RAPGEF1-207ENST00000481260 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
RAPGEF1-207ENST00000481260 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
RAPGEF1-207ENST00000481260 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
RAPGEF1-207ENST00000481260 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
RAPGEF1-207ENST00000481260 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
RAPGEF1-207ENST00000481260 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
RAPGEF1-207ENST00000481260 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
RAPGEF1-207ENST00000481260 TNP1P09430 55 aa4.11□□□□□ -1.75
RAPGEF1-207ENST00000481260 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
RAPGEF1-207ENST00000481260 MT1LQ93083 61 aa4.08□□□□□ -1.76
RAPGEF1-207ENST00000481260 MT1GP13640 62 aa4.05□□□□□ -1.76
RAPGEF1-207ENST00000481260 MT1MQ8N339 61 aa4.05□□□□□ -1.76
RAPGEF1-207ENST00000481260 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
RAPGEF1-207ENST00000481260 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
RAPGEF1-207ENST00000481260 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
RAPGEF1-207ENST00000481260 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
RAPGEF1-207ENST00000481260 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
RAPGEF1-207ENST00000481260 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
RAPGEF1-207ENST00000481260 MT4P47944 62 aa3.87□□□□□ -1.79
RAPGEF1-207ENST00000481260 INE1O15225 51 aa3.84□□□□□ -1.79
RAPGEF1-207ENST00000481260 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
RAPGEF1-207ENST00000481260 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
RAPGEF1-207ENST00000481260 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
RAPGEF1-207ENST00000481260 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF1-207ENST00000481260 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
RAPGEF1-207ENST00000481260 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
RAPGEF1-207ENST00000481260 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
RAPGEF1-207ENST00000481260 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
RAPGEF1-207ENST00000481260 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
RAPGEF1-207ENST00000481260 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
RAPGEF1-207ENST00000481260 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
RAPGEF1-207ENST00000481260 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
RAPGEF1-207ENST00000481260 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
RAPGEF1-207ENST00000481260 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
RAPGEF1-207ENST00000481260 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
RAPGEF1-207ENST00000481260 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
RAPGEF1-207ENST00000481260 MT1AP04731 61 aa3.44□□□□□ -1.86
RAPGEF1-207ENST00000481260 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
RAPGEF1-207ENST00000481260 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
RAPGEF1-207ENST00000481260 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
RAPGEF1-207ENST00000481260 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
RAPGEF1-207ENST00000481260 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
RAPGEF1-207ENST00000481260 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
RAPGEF1-207ENST00000481260 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
RAPGEF1-207ENST00000481260 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
RAPGEF1-207ENST00000481260 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
RAPGEF1-207ENST00000481260 MT3P25713 68 aa3.1□□□□□ -1.91
RAPGEF1-207ENST00000481260 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
RAPGEF1-207ENST00000481260 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
RAPGEF1-207ENST00000481260 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
RAPGEF1-207ENST00000481260 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
RAPGEF1-207ENST00000481260 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
RAPGEF1-207ENST00000481260 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
RAPGEF1-207ENST00000481260 PRM1P04553 51 aa2.57□□□□□ -2
RAPGEF1-207ENST00000481260 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
RAPGEF1-207ENST00000481260 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
RAPGEF1-207ENST00000481260 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
RAPGEF1-207ENST00000481260 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
RAPGEF1-207ENST00000481260 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
RAPGEF1-207ENST00000481260 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
RAPGEF1-207ENST00000481260 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
RAPGEF1-207ENST00000481260 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
RAPGEF1-207ENST00000481260 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 179 ms