RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 MT1LQ93083 61 aa3.33□□□□□ -1.88
SMARCE1-210ENST00000481231 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
SMARCE1-210ENST00000481231 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
SMARCE1-210ENST00000481231 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-210ENST00000481231 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
SMARCE1-210ENST00000481231 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
SMARCE1-210ENST00000481231 SPATA8Q6RVD6 105 aa3.28□□□□□ -1.88
SMARCE1-210ENST00000481231 MUC5ACP98088 5654 aa3.28□□□□□ -1.89
SMARCE1-210ENST00000481231 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
SMARCE1-210ENST00000481231 COA5Q86WW8 74 aa3.24□□□□□ -1.89
SMARCE1-210ENST00000481231 SEC61GP60059 68 aa3.23□□□□□ -1.89
SMARCE1-210ENST00000481231 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
SMARCE1-210ENST00000481231 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
SMARCE1-210ENST00000481231 A0A1B0GU33 70 aa3.22□□□□□ -1.89
SMARCE1-210ENST00000481231 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
SMARCE1-210ENST00000481231 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-210ENST00000481231 SERP2Q8N6R1 65 aa3.16□□□□□ -1.9
SMARCE1-210ENST00000481231 K7ERU9 68 aa3.14□□□□□ -1.91
SMARCE1-210ENST00000481231 TNP1P09430 55 aa3.14□□□□□ -1.91
SMARCE1-210ENST00000481231 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
SMARCE1-210ENST00000481231 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
SMARCE1-210ENST00000481231 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
SMARCE1-210ENST00000481231 A8MU10 97 aa3.12□□□□□ -1.91
SMARCE1-210ENST00000481231 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-210ENST00000481231 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-210ENST00000481231 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
SMARCE1-210ENST00000481231 A0A1B0GU69 56 aa3.05□□□□□ -1.92
SMARCE1-210ENST00000481231 H7BZZ5 65 aa3.02□□□□□ -1.93
SMARCE1-210ENST00000481231 COX7CP15954 63 aa2.99□□□□□ -1.93
SMARCE1-210ENST00000481231 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
SMARCE1-210ENST00000481231 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
SMARCE1-210ENST00000481231 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
SMARCE1-210ENST00000481231 V9GYY9 64 aa2.9□□□□□ -1.95
SMARCE1-210ENST00000481231 KRTAP25-1Q3LHN0 102 aa2.87□□□□□ -1.95
SMARCE1-210ENST00000481231 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
SMARCE1-210ENST00000481231 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
SMARCE1-210ENST00000481231 MT1AP04731 61 aa2.82□□□□□ -1.96
SMARCE1-210ENST00000481231 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
SMARCE1-210ENST00000481231 MT3P25713 68 aa2.81□□□□□ -1.96
SMARCE1-210ENST00000481231 UQCR11O14957 56 aa2.8□□□□□ -1.96
SMARCE1-210ENST00000481231 ANAPC13Q9BS18 74 aa2.77□□□□□ -1.97
SMARCE1-210ENST00000481231 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-210ENST00000481231 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
SMARCE1-210ENST00000481231 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
SMARCE1-210ENST00000481231 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
SMARCE1-210ENST00000481231 CCDC179H3BU77 68 aa2.75□□□□□ -1.97
SMARCE1-210ENST00000481231 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SMARCE1-210ENST00000481231 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
SMARCE1-210ENST00000481231 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
SMARCE1-210ENST00000481231 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
SMARCE1-210ENST00000481231 K7ERS5 55 aa2.7□□□□□ -1.98
SMARCE1-210ENST00000481231 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
SMARCE1-210ENST00000481231 TMEM258P61165 79 aa2.61□□□□□ -1.99
SMARCE1-210ENST00000481231 PSPHP1O15172 72 aa2.6□□□□□ -1.99
SMARCE1-210ENST00000481231 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
SMARCE1-210ENST00000481231 RPS28P62857 69 aaKnown RBP2.54□□□□□ -2
SMARCE1-210ENST00000481231 CDC42SE1Q9NRR8 79 aa2.54□□□□□ -2
SMARCE1-210ENST00000481231 Q1T7F1 81 aa2.52□□□□□ -2.01
SMARCE1-210ENST00000481231 ROMO1P60602 79 aa2.5□□□□□ -2.01
SMARCE1-210ENST00000481231 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
SMARCE1-210ENST00000481231 A6NED7 52 aa2.46□□□□□ -2.02
SMARCE1-210ENST00000481231 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
SMARCE1-210ENST00000481231 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
SMARCE1-210ENST00000481231 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
SMARCE1-210ENST00000481231 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
SMARCE1-210ENST00000481231 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SMARCE1-210ENST00000481231 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
SMARCE1-210ENST00000481231 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SMARCE1-210ENST00000481231 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
SMARCE1-210ENST00000481231 BRK1Q8WUW1 75 aa2.16□□□□□ -2.06
SMARCE1-210ENST00000481231 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
SMARCE1-210ENST00000481231 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
SMARCE1-210ENST00000481231 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SMARCE1-210ENST00000481231 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SMARCE1-210ENST00000481231 INE1O15225 51 aa1.73□□□□□ -2.13
SMARCE1-210ENST00000481231 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SMARCE1-210ENST00000481231 PRM1P04553 51 aa1.27□□□□□ -2.21
SMARCE1-210ENST00000481231 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms