RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
VTI1A-204ENST00000480057 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
VTI1A-204ENST00000480057 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
VTI1A-204ENST00000480057 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
VTI1A-204ENST00000480057 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
VTI1A-204ENST00000480057 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
VTI1A-204ENST00000480057 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
VTI1A-204ENST00000480057 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
VTI1A-204ENST00000480057 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
VTI1A-204ENST00000480057 KMT2DO14686 5537 aa4□□□□□ -1.77
VTI1A-204ENST00000480057 MT1EP04732 61 aa3.99□□□□□ -1.77
VTI1A-204ENST00000480057 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
VTI1A-204ENST00000480057 MT1LQ93083 61 aa3.92□□□□□ -1.78
VTI1A-204ENST00000480057 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
VTI1A-204ENST00000480057 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
VTI1A-204ENST00000480057 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
VTI1A-204ENST00000480057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
VTI1A-204ENST00000480057 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
VTI1A-204ENST00000480057 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
VTI1A-204ENST00000480057 MT1GP13640 62 aa3.82□□□□□ -1.8
VTI1A-204ENST00000480057 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
VTI1A-204ENST00000480057 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
VTI1A-204ENST00000480057 MT1MQ8N339 61 aa3.75□□□□□ -1.81
VTI1A-204ENST00000480057 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
VTI1A-204ENST00000480057 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
VTI1A-204ENST00000480057 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
VTI1A-204ENST00000480057 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
VTI1A-204ENST00000480057 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
VTI1A-204ENST00000480057 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
VTI1A-204ENST00000480057 SPRR2EP22531 72 aa3.64□□□□□ -1.83
VTI1A-204ENST00000480057 SPRR2BP35325 72 aa3.64□□□□□ -1.83
VTI1A-204ENST00000480057 SPRR2AP35326 72 aa3.64□□□□□ -1.83
VTI1A-204ENST00000480057 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
VTI1A-204ENST00000480057 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
VTI1A-204ENST00000480057 NEBP20929 6669 aa3.54□□□□□ -1.84
VTI1A-204ENST00000480057 SPRR2DP22532 72 aa3.51□□□□□ -1.85
VTI1A-204ENST00000480057 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
VTI1A-204ENST00000480057 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
VTI1A-204ENST00000480057 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
VTI1A-204ENST00000480057 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
VTI1A-204ENST00000480057 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
VTI1A-204ENST00000480057 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
VTI1A-204ENST00000480057 MT1AP04731 61 aa3.36□□□□□ -1.87
VTI1A-204ENST00000480057 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.88
VTI1A-204ENST00000480057 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
VTI1A-204ENST00000480057 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
VTI1A-204ENST00000480057 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
VTI1A-204ENST00000480057 INE1O15225 51 aa3.23□□□□□ -1.89
VTI1A-204ENST00000480057 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
VTI1A-204ENST00000480057 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
VTI1A-204ENST00000480057 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
VTI1A-204ENST00000480057 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
VTI1A-204ENST00000480057 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
VTI1A-204ENST00000480057 MT3P25713 68 aa3.04□□□□□ -1.92
VTI1A-204ENST00000480057 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
VTI1A-204ENST00000480057 MT4P47944 62 aa2.99□□□□□ -1.93
VTI1A-204ENST00000480057 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
VTI1A-204ENST00000480057 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
VTI1A-204ENST00000480057 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
VTI1A-204ENST00000480057 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
VTI1A-204ENST00000480057 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
VTI1A-204ENST00000480057 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
VTI1A-204ENST00000480057 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
VTI1A-204ENST00000480057 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
VTI1A-204ENST00000480057 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
VTI1A-204ENST00000480057 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
VTI1A-204ENST00000480057 PRM1P04553 51 aa2.5□□□□□ -2.01
VTI1A-204ENST00000480057 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
VTI1A-204ENST00000480057 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
VTI1A-204ENST00000480057 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
VTI1A-204ENST00000480057 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
VTI1A-204ENST00000480057 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
VTI1A-204ENST00000480057 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
VTI1A-204ENST00000480057 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
VTI1A-204ENST00000480057 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
VTI1A-204ENST00000480057 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
VTI1A-204ENST00000480057 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
VTI1A-204ENST00000480057 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms