RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 MT1LQ93083 61 aa2.37□□□□□ -2.03
FN1-220ENST00000480024 A8MU10 97 aa2.35□□□□□ -2.03
FN1-220ENST00000480024 H7BZZ5 65 aa2.35□□□□□ -2.03
FN1-220ENST00000480024 COX7CP15954 63 aa2.35□□□□□ -2.03
FN1-220ENST00000480024 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
FN1-220ENST00000480024 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
FN1-220ENST00000480024 SMIM26A0A096LP01 95 aa2.34□□□□□ -2.03
FN1-220ENST00000480024 A0A1B0GU69 56 aa2.34□□□□□ -2.03
FN1-220ENST00000480024 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
FN1-220ENST00000480024 TNP1P09430 55 aa2.31□□□□□ -2.04
FN1-220ENST00000480024 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
FN1-220ENST00000480024 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
FN1-220ENST00000480024 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
FN1-220ENST00000480024 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
FN1-220ENST00000480024 PRR15LQ9BU68 103 aa2.24□□□□□ -2.05
FN1-220ENST00000480024 ANAPC13Q9BS18 74 aa2.23□□□□□ -2.05
FN1-220ENST00000480024 SVIPQ8NHG7 77 aa2.2□□□□□ -2.06
FN1-220ENST00000480024 CCDC179H3BU77 68 aa2.19□□□□□ -2.06
FN1-220ENST00000480024 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
FN1-220ENST00000480024 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
FN1-220ENST00000480024 ATP5EP56381 51 aaPredicted RBP2.18□□□□□ -2.06
FN1-220ENST00000480024 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
FN1-220ENST00000480024 LINC01558Q9Y6Z2 57 aa2.18□□□□□ -2.06
FN1-220ENST00000480024 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
FN1-220ENST00000480024 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
FN1-220ENST00000480024 UQCR11O14957 56 aa2.15□□□□□ -2.07
FN1-220ENST00000480024 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
FN1-220ENST00000480024 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
FN1-220ENST00000480024 PCP4P48539 62 aa2.1□□□□□ -2.07
FN1-220ENST00000480024 MIR22HGQ0VDD5 57 aa2.1□□□□□ -2.07
FN1-220ENST00000480024 TMEM258P61165 79 aa2.09□□□□□ -2.07
FN1-220ENST00000480024 K7ERS5 55 aa2.08□□□□□ -2.08
FN1-220ENST00000480024 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
FN1-220ENST00000480024 KRTAP15-1Q3LI76 137 aa2.06□□□□□ -2.08
FN1-220ENST00000480024 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
FN1-220ENST00000480024 KRTAP23-1A1A580 65 aa2.03□□□□□ -2.08
FN1-220ENST00000480024 PSPHP1O15172 72 aa2.03□□□□□ -2.08
FN1-220ENST00000480024 MT1AP04731 61 aa2.02□□□□□ -2.09
FN1-220ENST00000480024 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
FN1-220ENST00000480024 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
FN1-220ENST00000480024 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
FN1-220ENST00000480024 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
FN1-220ENST00000480024 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
FN1-220ENST00000480024 V9GYY9 64 aa1.98□□□□□ -2.09
FN1-220ENST00000480024 Q1T7F1 81 aa1.97□□□□□ -2.09
FN1-220ENST00000480024 A6NED7 52 aa1.96□□□□□ -2.1
FN1-220ENST00000480024 CDC42SE1Q9NRR8 79 aa1.96□□□□□ -2.1
FN1-220ENST00000480024 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
FN1-220ENST00000480024 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
FN1-220ENST00000480024 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
FN1-220ENST00000480024 RPS28P62857 69 aaKnown RBP1.93□□□□□ -2.1
FN1-220ENST00000480024 ROMO1P60602 79 aa1.92□□□□□ -2.1
FN1-220ENST00000480024 MT3P25713 68 aa1.84□□□□□ -2.11
FN1-220ENST00000480024 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
FN1-220ENST00000480024 PRO0628Q9UI54 55 aa1.79□□□□□ -2.12
FN1-220ENST00000480024 PMAIP1Q13794 54 aa1.7□□□□□ -2.14
FN1-220ENST00000480024 LCE1EQ5T753 118 aa1.69□□□□□ -2.14
FN1-220ENST00000480024 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
FN1-220ENST00000480024 BRK1Q8WUW1 75 aa1.69□□□□□ -2.14
FN1-220ENST00000480024 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
FN1-220ENST00000480024 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
FN1-220ENST00000480024 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
FN1-220ENST00000480024 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
FN1-220ENST00000480024 A0A0A0MQY5 61 aa1.46□□□□□ -2.18
FN1-220ENST00000480024 PRAC1Q96KF2 57 aa1.46□□□□□ -2.18
FN1-220ENST00000480024 LCE3DQ9BYE3 92 aa1.46□□□□□ -2.18
FN1-220ENST00000480024 LCE1FQ5T754 118 aa1.4□□□□□ -2.19
FN1-220ENST00000480024 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
FN1-220ENST00000480024 LUZP6Q538Z0 58 aa1.38□□□□□ -2.19
FN1-220ENST00000480024 LCE3EQ5T5B0 92 aa1.36□□□□□ -2.19
FN1-220ENST00000480024 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
FN1-220ENST00000480024 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
FN1-220ENST00000480024 NDUFAF8A1L188 74 aa1.25□□□□□ -2.21
FN1-220ENST00000480024 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
FN1-220ENST00000480024 INE1O15225 51 aa1.2□□□□□ -2.22
FN1-220ENST00000480024 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
FN1-220ENST00000480024 PRM1P04553 51 aa0.99□□□□□ -2.25
FN1-220ENST00000480024 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 19.6 ms