RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SP140-210ENST00000479539 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
SP140-210ENST00000479539 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
SP140-210ENST00000479539 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
SP140-210ENST00000479539 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
SP140-210ENST00000479539 A8MU10 97 aa3.95□□□□□ -1.78
SP140-210ENST00000479539 MT1EP04732 61 aa3.93□□□□□ -1.78
SP140-210ENST00000479539 MT3P25713 68 aa3.93□□□□□ -1.78
SP140-210ENST00000479539 PRR15LQ9BU68 103 aa3.93□□□□□ -1.78
SP140-210ENST00000479539 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
SP140-210ENST00000479539 TMEM258P61165 79 aa3.91□□□□□ -1.78
SP140-210ENST00000479539 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
SP140-210ENST00000479539 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
SP140-210ENST00000479539 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
SP140-210ENST00000479539 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
SP140-210ENST00000479539 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
SP140-210ENST00000479539 TNP1P09430 55 aa3.83□□□□□ -1.8
SP140-210ENST00000479539 UQCR11O14957 56 aa3.81□□□□□ -1.8
SP140-210ENST00000479539 MT1GP13640 62 aa3.81□□□□□ -1.8
SP140-210ENST00000479539 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
SP140-210ENST00000479539 MT1LQ93083 61 aa3.76□□□□□ -1.81
SP140-210ENST00000479539 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
SP140-210ENST00000479539 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
SP140-210ENST00000479539 MT1MQ8N339 61 aa3.73□□□□□ -1.81
SP140-210ENST00000479539 V9GYY9 64 aa3.7□□□□□ -1.82
SP140-210ENST00000479539 Q1T7F1 81 aa3.69□□□□□ -1.82
SP140-210ENST00000479539 PSPHP1O15172 72 aa3.67□□□□□ -1.82
SP140-210ENST00000479539 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
SP140-210ENST00000479539 K7ERS5 55 aa3.64□□□□□ -1.83
SP140-210ENST00000479539 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
SP140-210ENST00000479539 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SP140-210ENST00000479539 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SP140-210ENST00000479539 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
SP140-210ENST00000479539 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
SP140-210ENST00000479539 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SP140-210ENST00000479539 A6NED7 52 aa3.54□□□□□ -1.84
SP140-210ENST00000479539 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
SP140-210ENST00000479539 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
SP140-210ENST00000479539 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
SP140-210ENST00000479539 MT4P47944 62 aa3.52□□□□□ -1.85
SP140-210ENST00000479539 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SP140-210ENST00000479539 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
SP140-210ENST00000479539 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
SP140-210ENST00000479539 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
SP140-210ENST00000479539 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
SP140-210ENST00000479539 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
SP140-210ENST00000479539 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
SP140-210ENST00000479539 ROMO1P60602 79 aa3.41□□□□□ -1.86
SP140-210ENST00000479539 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
SP140-210ENST00000479539 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
SP140-210ENST00000479539 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SP140-210ENST00000479539 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
SP140-210ENST00000479539 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
SP140-210ENST00000479539 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SP140-210ENST00000479539 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
SP140-210ENST00000479539 MT1AP04731 61 aa3.2□□□□□ -1.9
SP140-210ENST00000479539 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
SP140-210ENST00000479539 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
SP140-210ENST00000479539 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
SP140-210ENST00000479539 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SP140-210ENST00000479539 BRK1Q8WUW1 75 aa3.06□□□□□ -1.92
SP140-210ENST00000479539 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SP140-210ENST00000479539 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
SP140-210ENST00000479539 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SP140-210ENST00000479539 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SP140-210ENST00000479539 PRO0628Q9UI54 55 aa2.69□□□□□ -1.98
SP140-210ENST00000479539 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
SP140-210ENST00000479539 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SP140-210ENST00000479539 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
SP140-210ENST00000479539 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
SP140-210ENST00000479539 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
SP140-210ENST00000479539 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
SP140-210ENST00000479539 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SP140-210ENST00000479539 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SP140-210ENST00000479539 PRM1P04553 51 aa1.73□□□□□ -2.13
SP140-210ENST00000479539 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SP140-210ENST00000479539 INE1O15225 51 aa1.51□□□□□ -2.17
SP140-210ENST00000479539 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 39.2 ms