RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
GCA-208ENST00000479199 PSPHP1O15172 72 aa4.49□□□□□ -1.69
GCA-208ENST00000479199 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
GCA-208ENST00000479199 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
GCA-208ENST00000479199 MT4P47944 62 aa4.39□□□□□ -1.71
GCA-208ENST00000479199 A0A1B0GU33 70 aa4.38□□□□□ -1.71
GCA-208ENST00000479199 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
GCA-208ENST00000479199 A6NED7 52 aa4.37□□□□□ -1.71
GCA-208ENST00000479199 UQCR11O14957 56 aa4.36□□□□□ -1.71
GCA-208ENST00000479199 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
GCA-208ENST00000479199 MT1GP13640 62 aa4.34□□□□□ -1.71
GCA-208ENST00000479199 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
GCA-208ENST00000479199 A0A0D9SG42 100 aa4.31□□□□□ -1.72
GCA-208ENST00000479199 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
GCA-208ENST00000479199 MT1MQ8N339 61 aa4.31□□□□□ -1.72
GCA-208ENST00000479199 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
GCA-208ENST00000479199 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
GCA-208ENST00000479199 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
GCA-208ENST00000479199 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
GCA-208ENST00000479199 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
GCA-208ENST00000479199 MT1LQ93083 61 aa4.25□□□□□ -1.73
GCA-208ENST00000479199 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
GCA-208ENST00000479199 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
GCA-208ENST00000479199 A8MU10 97 aa4.22□□□□□ -1.73
GCA-208ENST00000479199 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
GCA-208ENST00000479199 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
GCA-208ENST00000479199 K7ERS5 55 aa4.15□□□□□ -1.75
GCA-208ENST00000479199 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
GCA-208ENST00000479199 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
GCA-208ENST00000479199 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
GCA-208ENST00000479199 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
GCA-208ENST00000479199 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
GCA-208ENST00000479199 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
GCA-208ENST00000479199 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
GCA-208ENST00000479199 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
GCA-208ENST00000479199 TNP1P09430 55 aa4□□□□□ -1.77
GCA-208ENST00000479199 SVIPQ8NHG7 77 aa4□□□□□ -1.77
GCA-208ENST00000479199 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
GCA-208ENST00000479199 ROMO1P60602 79 aa3.95□□□□□ -1.78
GCA-208ENST00000479199 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
GCA-208ENST00000479199 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
GCA-208ENST00000479199 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
GCA-208ENST00000479199 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
GCA-208ENST00000479199 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
GCA-208ENST00000479199 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
GCA-208ENST00000479199 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
GCA-208ENST00000479199 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
GCA-208ENST00000479199 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
GCA-208ENST00000479199 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
GCA-208ENST00000479199 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
GCA-208ENST00000479199 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
GCA-208ENST00000479199 MT1AP04731 61 aa3.61□□□□□ -1.83
GCA-208ENST00000479199 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
GCA-208ENST00000479199 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
GCA-208ENST00000479199 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
GCA-208ENST00000479199 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
GCA-208ENST00000479199 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
GCA-208ENST00000479199 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
GCA-208ENST00000479199 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
GCA-208ENST00000479199 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
GCA-208ENST00000479199 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
GCA-208ENST00000479199 MT3P25713 68 aa3.28□□□□□ -1.88
GCA-208ENST00000479199 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
GCA-208ENST00000479199 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
GCA-208ENST00000479199 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
GCA-208ENST00000479199 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
GCA-208ENST00000479199 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
GCA-208ENST00000479199 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
GCA-208ENST00000479199 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
GCA-208ENST00000479199 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
GCA-208ENST00000479199 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
GCA-208ENST00000479199 INE1O15225 51 aa2.49□□□□□ -2.01
GCA-208ENST00000479199 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
GCA-208ENST00000479199 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
GCA-208ENST00000479199 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
GCA-208ENST00000479199 PRM1P04553 51 aa2.05□□□□□ -2.08
GCA-208ENST00000479199 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
GCA-208ENST00000479199 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms