RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	SPRR2E	P22531	72 aa		6.83	□□□□□ -1.32
RFK-204	ENST00000479197	SPRR2B	P35325	72 aa		6.83	□□□□□ -1.32
RFK-204	ENST00000479197	SPRR2A	P35326	72 aa		6.83	□□□□□ -1.32
RFK-204	ENST00000479197	LCE1A	Q5T7P2	110 aa		6.78	□□□□□ -1.32
RFK-204	ENST00000479197	KRTAP19-7	Q3SYF9	63 aa		6.74	□□□□□ -1.33
RFK-204	ENST00000479197	CDC42SE1	Q9NRR8	79 aa		6.71	□□□□□ -1.33
RFK-204	ENST00000479197	LCE3A	Q5TA76	89 aa		6.7	□□□□□ -1.34
RFK-204	ENST00000479197	MT1E	P04732	61 aa		6.66	□□□□□ -1.34
RFK-204	ENST00000479197	KRTAP19-5	Q3LI72	72 aa		6.66	□□□□□ -1.34
RFK-204	ENST00000479197	KRTAP25-1	Q3LHN0	102 aa		6.66	□□□□□ -1.34
RFK-204	ENST00000479197	KRTAP20-1	Q3LI63	56 aa		6.61	□□□□□ -1.35
RFK-204	ENST00000479197	SPRR2D	P22532	72 aa		6.6	□□□□□ -1.35
RFK-204	ENST00000479197	KRTAP19-3	Q7Z4W3	81 aa		6.54	□□□□□ -1.36
RFK-204	ENST00000479197	KRTAP2-3	P0C7H8	128 aa		6.53	□□□□□ -1.36
RFK-204	ENST00000479197	KRTAP2-4	Q9BYR9	128 aa		6.53	□□□□□ -1.36
RFK-204	ENST00000479197	ROMO1	P60602	79 aa		6.5	□□□□□ -1.37
RFK-204	ENST00000479197	KRTAP12-3	P60328	96 aa		6.45	□□□□□ -1.38
RFK-204	ENST00000479197	MT1L	Q93083	61 aa		6.43	□□□□□ -1.38
RFK-204	ENST00000479197	KRTAP23-1	A1A580	65 aa		6.42	□□□□□ -1.38
RFK-204	ENST00000479197	MT1G	P13640	62 aa		6.42	□□□□□ -1.38
RFK-204	ENST00000479197	PP632	Q6XCG6	107 aa		6.38	□□□□□ -1.39
RFK-204	ENST00000479197	BRK1	Q8WUW1	75 aa		6.37	□□□□□ -1.39
RFK-204	ENST00000479197	KRTAP2-2	Q9BYT5	123 aa		6.35	□□□□□ -1.39
RFK-204	ENST00000479197	KRTAP2-1	Q9BYU5	128 aa		6.35	□□□□□ -1.39
RFK-204	ENST00000479197	MT1M	Q8N339	61 aa		6.32	□□□□□ -1.4
RFK-204	ENST00000479197	DST	Q03001	7570 aa	Known RBP	6.27	□□□□□ -1.41
RFK-204	ENST00000479197	KRTAP5-3	Q6L8H2	238 aa		6.26	□□□□□ -1.41
RFK-204	ENST00000479197	SVIP	Q8NHG7	77 aa		6.19	□□□□□ -1.42
RFK-204	ENST00000479197	KRTAP4-3	Q9BYR4	195 aa		6.15	□□□□□ -1.42
RFK-204	ENST00000479197	KRTAP15-1	Q3LI76	137 aa		6.15	□□□□□ -1.43
RFK-204	ENST00000479197	PMAIP1	Q13794	54 aa		6	□□□□□ -1.45
RFK-204	ENST00000479197	LCE3C	Q5T5A8	94 aa		5.97	□□□□□ -1.45
RFK-204	ENST00000479197	PRO0628	Q9UI54	55 aa		5.87	□□□□□ -1.47
RFK-204	ENST00000479197	KRTAP5-4	Q6L8H1	288 aa		5.81	□□□□□ -1.48
RFK-204	ENST00000479197	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.77	□□□□□ -1.49
RFK-204	ENST00000479197	MT4	P47944	62 aa		5.74	□□□□□ -1.49
RFK-204	ENST00000479197	PRAC1	Q96KF2	57 aa		5.69	□□□□□ -1.5
RFK-204	ENST00000479197	HMCN1	Q96RW7	5635 aa		5.66	□□□□□ -1.5
RFK-204	ENST00000479197	KRTAP9-6	A8MVA2	160 aa		5.62	□□□□□ -1.51
RFK-204	ENST00000479197	KTN1-AS1	Q86SY8	53 aa		5.53	□□□□□ -1.52
RFK-204	ENST00000479197	KRTAP12-4	P60329	112 aa		5.53	□□□□□ -1.52
RFK-204	ENST00000479197	SPRR5	A0A1B0GTR4	108 aa		5.48	□□□□□ -1.53
RFK-204	ENST00000479197	MT1A	P04731	61 aa		5.48	□□□□□ -1.53
RFK-204	ENST00000479197	SYNE1	Q8NF91	8797 aa	Known RBP	5.46	□□□□□ -1.53
RFK-204	ENST00000479197	KRTAP20-2	Q3LI61	65 aa		5.46	□□□□□ -1.54
RFK-204	ENST00000479197	KRTAP6-1	Q3LI64	71 aa		5.42	□□□□□ -1.54
RFK-204	ENST00000479197	GPR98	Q8WXG9	6306 aa		5.33	□□□□□ -1.56
RFK-204	ENST00000479197	AHNAK2	Q8IVF2	5795 aa		5.31	□□□□□ -1.56
RFK-204	ENST00000479197	KRTAP5-2	Q701N4	177 aa		5.16	□□□□□ -1.58
RFK-204	ENST00000479197	KRTAP5-10	Q6L8G5	202 aa		5.15	□□□□□ -1.58
RFK-204	ENST00000479197	KRTAP6-2	Q3LI66	62 aa		5.11	□□□□□ -1.59
RFK-204	ENST00000479197	MT3	P25713	68 aa		4.99	□□□□□ -1.61
RFK-204	ENST00000479197	KRTAP5-7	Q6L8G8	165 aa		4.9	□□□□□ -1.63
RFK-204	ENST00000479197	OBSCN	Q5VST9	7968 aa		4.77	□□□□□ -1.65
RFK-204	ENST00000479197	LUZP6	Q538Z0	58 aa		4.77	□□□□□ -1.65
RFK-204	ENST00000479197	KRTAP5-8	O75690	187 aa		4.72	□□□□□ -1.65
RFK-204	ENST00000479197	KRTAP5-11	Q6L8G4	156 aa		4.72	□□□□□ -1.65
RFK-204	ENST00000479197	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.72	□□□□□ -1.65
RFK-204	ENST00000479197	LCE1E	Q5T753	118 aa		4.63	□□□□□ -1.67
RFK-204	ENST00000479197	KRTAP5-1	Q6L8H4	278 aa		4.56	□□□□□ -1.68
RFK-204	ENST00000479197	MUC5AC	P98088	5654 aa		4.42	□□□□□ -1.7
RFK-204	ENST00000479197	LCE3D	Q9BYE3	92 aa		4.38	□□□□□ -1.71
RFK-204	ENST00000479197	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.31	□□□□□ -1.72
RFK-204	ENST00000479197	AHNAK	Q09666	5890 aa	Known RBP	4.22	□□□□□ -1.73
RFK-204	ENST00000479197	LCE1B	Q5T7P3	118 aa		4.21	□□□□□ -1.74
RFK-204	ENST00000479197	NDUFAF8	A1L188	74 aa		4.19	□□□□□ -1.74
RFK-204	ENST00000479197	LCE3E	Q5T5B0	92 aa		4.18	□□□□□ -1.74
RFK-204	ENST00000479197	LCE1C	Q5T751	118 aa		4.17	□□□□□ -1.74
RFK-204	ENST00000479197		A0A0A0MQY5	61 aa		4.07	□□□□□ -1.76
RFK-204	ENST00000479197	LCE1F	Q5T754	118 aa		4	□□□□□ -1.77
RFK-204	ENST00000479197	KRTAP4-4	Q9BYR3	166 aa		3.92	□□□□□ -1.78
RFK-204	ENST00000479197	KRTAP21-2	Q3LI59	83 aa		3.56	□□□□□ -1.84
RFK-204	ENST00000479197	INE1	O15225	51 aa		3.51	□□□□□ -1.85
RFK-204	ENST00000479197	PRM1	P04553	51 aa		3.34	□□□□□ -1.87
RFK-204	ENST00000479197	PHGR1	C9JFL3	82 aa		3.23	□□□□□ -1.89
RFK-204	ENST00000479197	MUC19	Q7Z5P9	8384 aa		2.91	□□□□□ -1.94
RFK-204	ENST00000479197	KRTAP21-1	Q3LI58	79 aa		2.26	□□□□□ -2.05
RFK-204	ENST00000479197	MUC16	Q8WXI7	14507 aa		2.03	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms