RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.79
HDLBP-237ENST00000479169 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
HDLBP-237ENST00000479169 MT1LQ93083 61 aa3.89□□□□□ -1.79
HDLBP-237ENST00000479169 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
HDLBP-237ENST00000479169 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
HDLBP-237ENST00000479169 SMIM26A0A096LP01 95 aa3.82□□□□□ -1.8
HDLBP-237ENST00000479169 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
HDLBP-237ENST00000479169 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
HDLBP-237ENST00000479169 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
HDLBP-237ENST00000479169 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
HDLBP-237ENST00000479169 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
HDLBP-237ENST00000479169 COA5Q86WW8 74 aa3.75□□□□□ -1.81
HDLBP-237ENST00000479169 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
HDLBP-237ENST00000479169 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
HDLBP-237ENST00000479169 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
HDLBP-237ENST00000479169 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
HDLBP-237ENST00000479169 Q1T7F1 81 aa3.72□□□□□ -1.81
HDLBP-237ENST00000479169 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
HDLBP-237ENST00000479169 PSPHP1O15172 72 aa3.69□□□□□ -1.82
HDLBP-237ENST00000479169 A0A1B0GU33 70 aa3.65□□□□□ -1.83
HDLBP-237ENST00000479169 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.83
HDLBP-237ENST00000479169 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
HDLBP-237ENST00000479169 TNP1P09430 55 aa3.61□□□□□ -1.83
HDLBP-237ENST00000479169 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
HDLBP-237ENST00000479169 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
HDLBP-237ENST00000479169 A8MU10 97 aa3.57□□□□□ -1.84
HDLBP-237ENST00000479169 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
HDLBP-237ENST00000479169 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
HDLBP-237ENST00000479169 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
HDLBP-237ENST00000479169 A0A1B0GU69 56 aa3.55□□□□□ -1.84
HDLBP-237ENST00000479169 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
HDLBP-237ENST00000479169 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
HDLBP-237ENST00000479169 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
HDLBP-237ENST00000479169 A6NED7 52 aa3.52□□□□□ -1.85
HDLBP-237ENST00000479169 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
HDLBP-237ENST00000479169 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
HDLBP-237ENST00000479169 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
HDLBP-237ENST00000479169 UQCR11O14957 56 aa3.47□□□□□ -1.85
HDLBP-237ENST00000479169 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
HDLBP-237ENST00000479169 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
HDLBP-237ENST00000479169 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
HDLBP-237ENST00000479169 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
HDLBP-237ENST00000479169 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
HDLBP-237ENST00000479169 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
HDLBP-237ENST00000479169 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
HDLBP-237ENST00000479169 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
HDLBP-237ENST00000479169 K7ERS5 55 aa3.29□□□□□ -1.88
HDLBP-237ENST00000479169 MT1AP04731 61 aa3.29□□□□□ -1.88
HDLBP-237ENST00000479169 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
HDLBP-237ENST00000479169 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
HDLBP-237ENST00000479169 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
HDLBP-237ENST00000479169 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
HDLBP-237ENST00000479169 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
HDLBP-237ENST00000479169 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
HDLBP-237ENST00000479169 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
HDLBP-237ENST00000479169 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
HDLBP-237ENST00000479169 ROMO1P60602 79 aa3.14□□□□□ -1.91
HDLBP-237ENST00000479169 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
HDLBP-237ENST00000479169 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
HDLBP-237ENST00000479169 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
HDLBP-237ENST00000479169 MT3P25713 68 aa3.01□□□□□ -1.93
HDLBP-237ENST00000479169 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
HDLBP-237ENST00000479169 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
HDLBP-237ENST00000479169 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
HDLBP-237ENST00000479169 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
HDLBP-237ENST00000479169 INE1O15225 51 aa2.58□□□□□ -2
HDLBP-237ENST00000479169 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
HDLBP-237ENST00000479169 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
HDLBP-237ENST00000479169 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
HDLBP-237ENST00000479169 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
HDLBP-237ENST00000479169 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
HDLBP-237ENST00000479169 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
HDLBP-237ENST00000479169 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
HDLBP-237ENST00000479169 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
HDLBP-237ENST00000479169 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
HDLBP-237ENST00000479169 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
HDLBP-237ENST00000479169 PRM1P04553 51 aa1.63□□□□□ -2.15
HDLBP-237ENST00000479169 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 165.3 ms