RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.46
C9orf3-217ENST00000479161 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
C9orf3-217ENST00000479161 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
C9orf3-217ENST00000479161 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
C9orf3-217ENST00000479161 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
C9orf3-217ENST00000479161 TNP1P09430 55 aa5.8□□□□□ -1.48
C9orf3-217ENST00000479161 SPRR2DP22532 72 aa5.77□□□□□ -1.49
C9orf3-217ENST00000479161 MT1EP04732 61 aa5.74□□□□□ -1.49
C9orf3-217ENST00000479161 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
C9orf3-217ENST00000479161 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
C9orf3-217ENST00000479161 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
C9orf3-217ENST00000479161 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
C9orf3-217ENST00000479161 H3BS24 57 aa5.62□□□□□ -1.51
C9orf3-217ENST00000479161 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
C9orf3-217ENST00000479161 MT1GP13640 62 aa5.6□□□□□ -1.51
C9orf3-217ENST00000479161 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
C9orf3-217ENST00000479161 MT1LQ93083 61 aa5.52□□□□□ -1.53
C9orf3-217ENST00000479161 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
C9orf3-217ENST00000479161 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
C9orf3-217ENST00000479161 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
C9orf3-217ENST00000479161 MT1MQ8N339 61 aa5.45□□□□□ -1.54
C9orf3-217ENST00000479161 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
C9orf3-217ENST00000479161 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
C9orf3-217ENST00000479161 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
C9orf3-217ENST00000479161 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
C9orf3-217ENST00000479161 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
C9orf3-217ENST00000479161 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
C9orf3-217ENST00000479161 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
C9orf3-217ENST00000479161 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
C9orf3-217ENST00000479161 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
C9orf3-217ENST00000479161 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
C9orf3-217ENST00000479161 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
C9orf3-217ENST00000479161 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
C9orf3-217ENST00000479161 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
C9orf3-217ENST00000479161 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
C9orf3-217ENST00000479161 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
C9orf3-217ENST00000479161 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
C9orf3-217ENST00000479161 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
C9orf3-217ENST00000479161 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
C9orf3-217ENST00000479161 MT4P47944 62 aa5.03□□□□□ -1.6
C9orf3-217ENST00000479161 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
C9orf3-217ENST00000479161 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
C9orf3-217ENST00000479161 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
C9orf3-217ENST00000479161 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
C9orf3-217ENST00000479161 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
C9orf3-217ENST00000479161 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
C9orf3-217ENST00000479161 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
C9orf3-217ENST00000479161 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
C9orf3-217ENST00000479161 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
C9orf3-217ENST00000479161 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
C9orf3-217ENST00000479161 MT1AP04731 61 aa4.72□□□□□ -1.65
C9orf3-217ENST00000479161 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
C9orf3-217ENST00000479161 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
C9orf3-217ENST00000479161 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
C9orf3-217ENST00000479161 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
C9orf3-217ENST00000479161 INE1O15225 51 aa4.37□□□□□ -1.71
C9orf3-217ENST00000479161 MT3P25713 68 aa4.32□□□□□ -1.72
C9orf3-217ENST00000479161 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
C9orf3-217ENST00000479161 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
C9orf3-217ENST00000479161 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
C9orf3-217ENST00000479161 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
C9orf3-217ENST00000479161 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
C9orf3-217ENST00000479161 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
C9orf3-217ENST00000479161 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
C9orf3-217ENST00000479161 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
C9orf3-217ENST00000479161 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
C9orf3-217ENST00000479161 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
C9orf3-217ENST00000479161 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
C9orf3-217ENST00000479161 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
C9orf3-217ENST00000479161 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
C9orf3-217ENST00000479161 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
C9orf3-217ENST00000479161 PRM1P04553 51 aa3.15□□□□□ -1.91
C9orf3-217ENST00000479161 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
C9orf3-217ENST00000479161 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
C9orf3-217ENST00000479161 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
C9orf3-217ENST00000479161 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
C9orf3-217ENST00000479161 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
C9orf3-217ENST00000479161 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 73.5 ms