RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
ABCF3-212ENST00000478288 PSPHP1O15172 72 aa4.66□□□□□ -1.66
ABCF3-212ENST00000478288 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
ABCF3-212ENST00000478288 MT1MQ8N339 61 aa4.64□□□□□ -1.67
ABCF3-212ENST00000478288 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
ABCF3-212ENST00000478288 UQCR11O14957 56 aa4.62□□□□□ -1.67
ABCF3-212ENST00000478288 MT4P47944 62 aa4.61□□□□□ -1.67
ABCF3-212ENST00000478288 A8MU10 97 aa4.6□□□□□ -1.67
ABCF3-212ENST00000478288 MT1LQ93083 61 aa4.6□□□□□ -1.67
ABCF3-212ENST00000478288 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
ABCF3-212ENST00000478288 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
ABCF3-212ENST00000478288 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
ABCF3-212ENST00000478288 A6NED7 52 aa4.51□□□□□ -1.69
ABCF3-212ENST00000478288 TNP1P09430 55 aa4.48□□□□□ -1.69
ABCF3-212ENST00000478288 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
ABCF3-212ENST00000478288 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
ABCF3-212ENST00000478288 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
ABCF3-212ENST00000478288 K7ERS5 55 aa4.47□□□□□ -1.69
ABCF3-212ENST00000478288 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
ABCF3-212ENST00000478288 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
ABCF3-212ENST00000478288 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
ABCF3-212ENST00000478288 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
ABCF3-212ENST00000478288 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
ABCF3-212ENST00000478288 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
ABCF3-212ENST00000478288 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
ABCF3-212ENST00000478288 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
ABCF3-212ENST00000478288 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
ABCF3-212ENST00000478288 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
ABCF3-212ENST00000478288 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
ABCF3-212ENST00000478288 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
ABCF3-212ENST00000478288 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
ABCF3-212ENST00000478288 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
ABCF3-212ENST00000478288 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
ABCF3-212ENST00000478288 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
ABCF3-212ENST00000478288 ROMO1P60602 79 aa4.14□□□□□ -1.75
ABCF3-212ENST00000478288 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
ABCF3-212ENST00000478288 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
ABCF3-212ENST00000478288 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
ABCF3-212ENST00000478288 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
ABCF3-212ENST00000478288 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
ABCF3-212ENST00000478288 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
ABCF3-212ENST00000478288 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
ABCF3-212ENST00000478288 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
ABCF3-212ENST00000478288 MT1AP04731 61 aa3.92□□□□□ -1.78
ABCF3-212ENST00000478288 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
ABCF3-212ENST00000478288 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
ABCF3-212ENST00000478288 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
ABCF3-212ENST00000478288 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
ABCF3-212ENST00000478288 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
ABCF3-212ENST00000478288 H3BS24 57 aa3.82□□□□□ -1.8
ABCF3-212ENST00000478288 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
ABCF3-212ENST00000478288 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
ABCF3-212ENST00000478288 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
ABCF3-212ENST00000478288 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
ABCF3-212ENST00000478288 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
ABCF3-212ENST00000478288 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
ABCF3-212ENST00000478288 MT3P25713 68 aa3.6□□□□□ -1.83
ABCF3-212ENST00000478288 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
ABCF3-212ENST00000478288 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
ABCF3-212ENST00000478288 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
ABCF3-212ENST00000478288 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
ABCF3-212ENST00000478288 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
ABCF3-212ENST00000478288 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
ABCF3-212ENST00000478288 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
ABCF3-212ENST00000478288 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
ABCF3-212ENST00000478288 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
ABCF3-212ENST00000478288 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
ABCF3-212ENST00000478288 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
ABCF3-212ENST00000478288 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
ABCF3-212ENST00000478288 INE1O15225 51 aa2.69□□□□□ -1.98
ABCF3-212ENST00000478288 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
ABCF3-212ENST00000478288 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
ABCF3-212ENST00000478288 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
ABCF3-212ENST00000478288 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ABCF3-212ENST00000478288 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
ABCF3-212ENST00000478288 PRM1P04553 51 aa2.14□□□□□ -2.07
ABCF3-212ENST00000478288 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
ABCF3-212ENST00000478288 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms