RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
PLOD3-213ENST00000478264 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
PLOD3-213ENST00000478264 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
PLOD3-213ENST00000478264 SPRR2DP22532 72 aa6.55□□□□□ -1.36
PLOD3-213ENST00000478264 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
PLOD3-213ENST00000478264 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
PLOD3-213ENST00000478264 MT1LQ93083 61 aa6.51□□□□□ -1.37
PLOD3-213ENST00000478264 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
PLOD3-213ENST00000478264 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
PLOD3-213ENST00000478264 MT1GP13640 62 aa6.47□□□□□ -1.37
PLOD3-213ENST00000478264 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
PLOD3-213ENST00000478264 MT1MQ8N339 61 aa6.37□□□□□ -1.39
PLOD3-213ENST00000478264 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
PLOD3-213ENST00000478264 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
PLOD3-213ENST00000478264 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
PLOD3-213ENST00000478264 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
PLOD3-213ENST00000478264 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
PLOD3-213ENST00000478264 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
PLOD3-213ENST00000478264 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
PLOD3-213ENST00000478264 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
PLOD3-213ENST00000478264 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
PLOD3-213ENST00000478264 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
PLOD3-213ENST00000478264 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
PLOD3-213ENST00000478264 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
PLOD3-213ENST00000478264 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
PLOD3-213ENST00000478264 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
PLOD3-213ENST00000478264 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
PLOD3-213ENST00000478264 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
PLOD3-213ENST00000478264 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
PLOD3-213ENST00000478264 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
PLOD3-213ENST00000478264 MT4P47944 62 aa5.69□□□□□ -1.5
PLOD3-213ENST00000478264 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
PLOD3-213ENST00000478264 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
PLOD3-213ENST00000478264 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
PLOD3-213ENST00000478264 MT1AP04731 61 aa5.55□□□□□ -1.52
PLOD3-213ENST00000478264 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
PLOD3-213ENST00000478264 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
PLOD3-213ENST00000478264 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
PLOD3-213ENST00000478264 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
PLOD3-213ENST00000478264 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
PLOD3-213ENST00000478264 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
PLOD3-213ENST00000478264 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
PLOD3-213ENST00000478264 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
PLOD3-213ENST00000478264 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
PLOD3-213ENST00000478264 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
PLOD3-213ENST00000478264 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
PLOD3-213ENST00000478264 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
PLOD3-213ENST00000478264 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
PLOD3-213ENST00000478264 MT3P25713 68 aa5.06□□□□□ -1.6
PLOD3-213ENST00000478264 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
PLOD3-213ENST00000478264 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
PLOD3-213ENST00000478264 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
PLOD3-213ENST00000478264 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
PLOD3-213ENST00000478264 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
PLOD3-213ENST00000478264 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
PLOD3-213ENST00000478264 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
PLOD3-213ENST00000478264 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
PLOD3-213ENST00000478264 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
PLOD3-213ENST00000478264 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
PLOD3-213ENST00000478264 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
PLOD3-213ENST00000478264 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PLOD3-213ENST00000478264 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
PLOD3-213ENST00000478264 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
PLOD3-213ENST00000478264 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
PLOD3-213ENST00000478264 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
PLOD3-213ENST00000478264 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
PLOD3-213ENST00000478264 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
PLOD3-213ENST00000478264 INE1O15225 51 aa3.74□□□□□ -1.81
PLOD3-213ENST00000478264 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
PLOD3-213ENST00000478264 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
PLOD3-213ENST00000478264 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
PLOD3-213ENST00000478264 PRM1P04553 51 aa3.5□□□□□ -1.85
PLOD3-213ENST00000478264 H3BS24 57 aa3.32□□□□□ -1.88
PLOD3-213ENST00000478264 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
PLOD3-213ENST00000478264 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
PLOD3-213ENST00000478264 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PLOD3-213ENST00000478264 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
PLOD3-213ENST00000478264 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 96.6 ms