RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	PRO0628	Q9UI54	55 aa		4.7	□□□□□ -1.66
RBM28-204	ENST00000478061	SPRR2D	P22532	72 aa		4.68	□□□□□ -1.66
RBM28-204	ENST00000478061	KRTAP2-3	P0C7H8	128 aa		4.64	□□□□□ -1.67
RBM28-204	ENST00000478061	KRTAP19-3	Q7Z4W3	81 aa		4.64	□□□□□ -1.67
RBM28-204	ENST00000478061	KRTAP2-4	Q9BYR9	128 aa		4.64	□□□□□ -1.67
RBM28-204	ENST00000478061	LCE5A	Q5TCM9	118 aa		4.62	□□□□□ -1.67
RBM28-204	ENST00000478061	ROMO1	P60602	79 aa		4.61	□□□□□ -1.67
RBM28-204	ENST00000478061	KRTAP12-3	P60328	96 aa		4.58	□□□□□ -1.68
RBM28-204	ENST00000478061	MT1L	Q93083	61 aa		4.58	□□□□□ -1.68
RBM28-204	ENST00000478061	KRTAP23-1	A1A580	65 aa		4.56	□□□□□ -1.68
RBM28-204	ENST00000478061	MT1G	P13640	62 aa		4.56	□□□□□ -1.68
RBM28-204	ENST00000478061	LCE3B	Q5TA77	95 aa		4.53	□□□□□ -1.68
RBM28-204	ENST00000478061	BRK1	Q8WUW1	75 aa		4.51	□□□□□ -1.69
RBM28-204	ENST00000478061	KRTAP2-2	Q9BYT5	123 aa		4.51	□□□□□ -1.69
RBM28-204	ENST00000478061	KRTAP2-1	Q9BYU5	128 aa		4.51	□□□□□ -1.69
RBM28-204	ENST00000478061	PP632	Q6XCG6	107 aa		4.5	□□□□□ -1.69
RBM28-204	ENST00000478061	MT1M	Q8N339	61 aa		4.49	□□□□□ -1.69
RBM28-204	ENST00000478061	PMAIP1	Q13794	54 aa		4.46	□□□□□ -1.7
RBM28-204	ENST00000478061	KRTAP4-3	Q9BYR4	195 aa		4.39	□□□□□ -1.71
RBM28-204	ENST00000478061	KRTAP4-7	Q9BYR0	210 aa		4.38	□□□□□ -1.71
RBM28-204	ENST00000478061	KRTAP15-1	Q3LI76	137 aa		4.37	□□□□□ -1.71
RBM28-204	ENST00000478061	KRTAP4-12	Q9BQ66	201 aa		4.33	□□□□□ -1.72
RBM28-204	ENST00000478061	KRTAP19-4	Q3LI73	84 aa		4.32	□□□□□ -1.72
RBM28-204	ENST00000478061	DST	Q03001	7570 aa	Known RBP	4.32	□□□□□ -1.72
RBM28-204	ENST00000478061	KRTAP9-9	Q9BYP9	154 aa		4.27	□□□□□ -1.73
RBM28-204	ENST00000478061	KRTAP9-4	Q9BYQ2	154 aa		4.27	□□□□□ -1.73
RBM28-204	ENST00000478061	LCE3C	Q5T5A8	94 aa		4.25	□□□□□ -1.73
RBM28-204	ENST00000478061	KTN1-AS1	Q86SY8	53 aa		4.24	□□□□□ -1.73
RBM28-204	ENST00000478061	GPR98	Q8WXG9	6306 aa		4.17	□□□□□ -1.74
RBM28-204	ENST00000478061	LCE4A	Q5TA78	99 aa		4.15	□□□□□ -1.75
RBM28-204	ENST00000478061	KRTAP4-9	Q9BYQ8	210 aa		4.15	□□□□□ -1.75
RBM28-204	ENST00000478061	KRTAP5-4	Q6L8H1	288 aa		4.14	□□□□□ -1.75
RBM28-204	ENST00000478061	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.1	□□□□□ -1.75
RBM28-204	ENST00000478061	LCE1D	Q5T752	114 aa		4.09	□□□□□ -1.75
RBM28-204	ENST00000478061	MT4	P47944	62 aa		4.07	□□□□□ -1.76
RBM28-204	ENST00000478061	PRAC1	Q96KF2	57 aa		4.06	□□□□□ -1.76
RBM28-204	ENST00000478061	HMCN1	Q96RW7	5635 aa		4.03	□□□□□ -1.77
RBM28-204	ENST00000478061	KRTAP9-6	A8MVA2	160 aa		4.02	□□□□□ -1.77
RBM28-204	ENST00000478061	KRTAP4-2	Q9BYR5	136 aa		3.93	□□□□□ -1.78
RBM28-204	ENST00000478061	KRTAP12-4	P60329	112 aa		3.92	□□□□□ -1.78
RBM28-204	ENST00000478061	SPRR5	A0A1B0GTR4	108 aa		3.9	□□□□□ -1.79
RBM28-204	ENST00000478061	MT1A	P04731	61 aa		3.9	□□□□□ -1.79
RBM28-204	ENST00000478061	KRTAP20-2	Q3LI61	65 aa		3.88	□□□□□ -1.79
RBM28-204	ENST00000478061	KRTAP6-1	Q3LI64	71 aa		3.86	□□□□□ -1.79
RBM28-204	ENST00000478061	SYNE1	Q8NF91	8797 aa	Known RBP	3.85	□□□□□ -1.79
RBM28-204	ENST00000478061	AHNAK2	Q8IVF2	5795 aa		3.83	□□□□□ -1.8
RBM28-204	ENST00000478061	KRTAP4-11	Q9BYQ6	195 aa		3.81	□□□□□ -1.8
RBM28-204	ENST00000478061	KRTAP5-3	Q6L8H2	238 aa		3.77	□□□□□ -1.81
RBM28-204	ENST00000478061	KRTAP5-10	Q6L8G5	202 aa		3.75	□□□□□ -1.81
RBM28-204	ENST00000478061	KRTAP5-2	Q701N4	177 aa		3.68	□□□□□ -1.82
RBM28-204	ENST00000478061	KRTAP5-7	Q6L8G8	165 aa		3.66	□□□□□ -1.82
RBM28-204	ENST00000478061		A0A0A0MQY5	61 aa		3.65	□□□□□ -1.83
RBM28-204	ENST00000478061	KRTAP6-2	Q3LI66	62 aa		3.64	□□□□□ -1.83
RBM28-204	ENST00000478061	MT3	P25713	68 aa		3.55	□□□□□ -1.84
RBM28-204	ENST00000478061	NDUFAF8	A1L188	74 aa		3.38	□□□□□ -1.87
RBM28-204	ENST00000478061	KRTAP5-8	O75690	187 aa		3.36	□□□□□ -1.87
RBM28-204	ENST00000478061	LUZP6	Q538Z0	58 aa		3.36	□□□□□ -1.87
RBM28-204	ENST00000478061	OBSCN	Q5VST9	7968 aa		3.26	□□□□□ -1.89
RBM28-204	ENST00000478061	KRTAP5-1	Q6L8H4	278 aa		3.24	□□□□□ -1.89
RBM28-204	ENST00000478061	AHNAK	Q09666	5890 aa	Known RBP	3.21	□□□□□ -1.9
RBM28-204	ENST00000478061	MUC5AC	P98088	5654 aa		3.2	□□□□□ -1.9
RBM28-204	ENST00000478061	LCE1E	Q5T753	118 aa		3.2	□□□□□ -1.9
RBM28-204	ENST00000478061	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.18	□□□□□ -1.9
RBM28-204	ENST00000478061	LCE3D	Q9BYE3	92 aa		3.11	□□□□□ -1.91
RBM28-204	ENST00000478061	LCE1B	Q5T7P3	118 aa		2.99	□□□□□ -1.93
RBM28-204	ENST00000478061	LCE1C	Q5T751	118 aa		2.97	□□□□□ -1.93
RBM28-204	ENST00000478061	LCE3E	Q5T5B0	92 aa		2.96	□□□□□ -1.94
RBM28-204	ENST00000478061	INE1	O15225	51 aa		2.94	□□□□□ -1.94
RBM28-204	ENST00000478061	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.73	□□□□□ -1.97
RBM28-204	ENST00000478061	KRTAP5-11	Q6L8G4	156 aa		2.66	□□□□□ -1.98
RBM28-204	ENST00000478061	LCE1F	Q5T754	118 aa		2.62	□□□□□ -1.99
RBM28-204	ENST00000478061	KRTAP21-2	Q3LI59	83 aa		2.54	□□□□□ -2
RBM28-204	ENST00000478061	PRM1	P04553	51 aa		2.37	□□□□□ -2.03
RBM28-204	ENST00000478061	PHGR1	C9JFL3	82 aa		2.29	□□□□□ -2.04
RBM28-204	ENST00000478061	KRTAP4-4	Q9BYR3	166 aa		2.29	□□□□□ -2.04
RBM28-204	ENST00000478061	MUC19	Q7Z5P9	8384 aa		2.01	□□□□□ -2.09
RBM28-204	ENST00000478061	KRTAP21-1	Q3LI58	79 aa		1.7	□□□□□ -2.14
RBM28-204	ENST00000478061	MUC16	Q8WXI7	14507 aa		1.49	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 103.3 ms