RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 M0QZ58 72 aa2.4□□□□□ -2.03
SF3B6-202ENST00000478050 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
SF3B6-202ENST00000478050 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
SF3B6-202ENST00000478050 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
SF3B6-202ENST00000478050 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
SF3B6-202ENST00000478050 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
SF3B6-202ENST00000478050 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
SF3B6-202ENST00000478050 CRIPTQ9P021 101 aa2.33□□□□□ -2.04
SF3B6-202ENST00000478050 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
SF3B6-202ENST00000478050 USH2AO75445 5202 aa2.31□□□□□ -2.04
SF3B6-202ENST00000478050 R4GN34 69 aa2.31□□□□□ -2.04
SF3B6-202ENST00000478050 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
SF3B6-202ENST00000478050 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
SF3B6-202ENST00000478050 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.04
SF3B6-202ENST00000478050 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
SF3B6-202ENST00000478050 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
SF3B6-202ENST00000478050 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
SF3B6-202ENST00000478050 M0R2T5 61 aa2.25□□□□□ -2.05
SF3B6-202ENST00000478050 MT1HP80294 61 aa2.23□□□□□ -2.05
SF3B6-202ENST00000478050 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
SF3B6-202ENST00000478050 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
SF3B6-202ENST00000478050 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
SF3B6-202ENST00000478050 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
SF3B6-202ENST00000478050 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
SF3B6-202ENST00000478050 KMT2DO14686 5537 aa2.2□□□□□ -2.06
SF3B6-202ENST00000478050 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
SF3B6-202ENST00000478050 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
SF3B6-202ENST00000478050 TNP1P09430 55 aa2.13□□□□□ -2.07
SF3B6-202ENST00000478050 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
SF3B6-202ENST00000478050 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
SF3B6-202ENST00000478050 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
SF3B6-202ENST00000478050 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.07
SF3B6-202ENST00000478050 MT2AP02795 61 aa2.06□□□□□ -2.08
SF3B6-202ENST00000478050 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
SF3B6-202ENST00000478050 MT1FP04733 61 aa2.05□□□□□ -2.08
SF3B6-202ENST00000478050 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
SF3B6-202ENST00000478050 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
SF3B6-202ENST00000478050 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
SF3B6-202ENST00000478050 MT1BP07438 61 aa1.99□□□□□ -2.09
SF3B6-202ENST00000478050 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SF3B6-202ENST00000478050 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
SF3B6-202ENST00000478050 SPRR2EP22531 72 aa1.96□□□□□ -2.1
SF3B6-202ENST00000478050 SPRR2BP35325 72 aa1.96□□□□□ -2.1
SF3B6-202ENST00000478050 SPRR2AP35326 72 aa1.96□□□□□ -2.1
SF3B6-202ENST00000478050 MT1XP80297 61 aa1.96□□□□□ -2.1
SF3B6-202ENST00000478050 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
SF3B6-202ENST00000478050 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
SF3B6-202ENST00000478050 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
SF3B6-202ENST00000478050 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
SF3B6-202ENST00000478050 SPRR2DP22532 72 aa1.91□□□□□ -2.1
SF3B6-202ENST00000478050 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
SF3B6-202ENST00000478050 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
SF3B6-202ENST00000478050 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
SF3B6-202ENST00000478050 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SF3B6-202ENST00000478050 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
SF3B6-202ENST00000478050 INE1O15225 51 aa1.77□□□□□ -2.13
SF3B6-202ENST00000478050 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
SF3B6-202ENST00000478050 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
SF3B6-202ENST00000478050 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
SF3B6-202ENST00000478050 MT1EP04732 61 aa1.71□□□□□ -2.14
SF3B6-202ENST00000478050 MT1LQ93083 61 aa1.71□□□□□ -2.14
SF3B6-202ENST00000478050 MT4P47944 62 aa1.7□□□□□ -2.14
SF3B6-202ENST00000478050 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
SF3B6-202ENST00000478050 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
SF3B6-202ENST00000478050 MT1GP13640 62 aa1.62□□□□□ -2.15
SF3B6-202ENST00000478050 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
SF3B6-202ENST00000478050 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
SF3B6-202ENST00000478050 MT1MQ8N339 61 aa1.6□□□□□ -2.15
SF3B6-202ENST00000478050 MT1AP04731 61 aa1.46□□□□□ -2.18
SF3B6-202ENST00000478050 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
SF3B6-202ENST00000478050 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
SF3B6-202ENST00000478050 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
SF3B6-202ENST00000478050 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
SF3B6-202ENST00000478050 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
SF3B6-202ENST00000478050 PRM1P04553 51 aa1.27□□□□□ -2.21
SF3B6-202ENST00000478050 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
SF3B6-202ENST00000478050 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
SF3B6-202ENST00000478050 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms