RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 HIST1H2BNQ99877 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 HIST1H2BMQ99879 126 aa1.23□□□□□ -2.21
VPS50-214ENST00000477935 K7EP34 96 aa1.22□□□□□ -2.21
VPS50-214ENST00000477935 COX8AP10176 69 aa1.22□□□□□ -2.21
VPS50-214ENST00000477935 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
VPS50-214ENST00000477935 C14orf132Q9NPU4 83 aa1.21□□□□□ -2.22
VPS50-214ENST00000477935 H3BPC8 53 aa1.2□□□□□ -2.22
VPS50-214ENST00000477935 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
VPS50-214ENST00000477935 VAMP8Q9BV40 100 aa1.19□□□□□ -2.22
VPS50-214ENST00000477935 MT1AP04731 61 aa1.18□□□□□ -2.22
VPS50-214ENST00000477935 ATXN8Q156A1 80 aa1.18□□□□□ -2.22
VPS50-214ENST00000477935 FXYD2P54710 66 aa1.17□□□□□ -2.22
VPS50-214ENST00000477935 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
VPS50-214ENST00000477935 ATOX1O00244 68 aa1.16□□□□□ -2.22
VPS50-214ENST00000477935 C14orf144Q96I85 54 aa1.15□□□□□ -2.23
VPS50-214ENST00000477935 TSTD3H0UI37 97 aa1.13□□□□□ -2.23
VPS50-214ENST00000477935 K7ERJ3 54 aa1.13□□□□□ -2.23
VPS50-214ENST00000477935 COA5Q86WW8 74 aa1.13□□□□□ -2.23
VPS50-214ENST00000477935 UBL5Q9BZL1 73 aa1.12□□□□□ -2.23
VPS50-214ENST00000477935 TNP1P09430 55 aa1.11□□□□□ -2.23
VPS50-214ENST00000477935 HSD52Q0P140 79 aa1.11□□□□□ -2.23
VPS50-214ENST00000477935 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
VPS50-214ENST00000477935 UQCRQO14949 82 aa1.1□□□□□ -2.23
VPS50-214ENST00000477935 SPTSSBQ8NFR3 76 aa1.1□□□□□ -2.23
VPS50-214ENST00000477935 TRAV7A0A075B6U4 112 aa1.09□□□□□ -2.23
VPS50-214ENST00000477935 H0Y9P7 68 aa1.09□□□□□ -2.23
VPS50-214ENST00000477935 SPATA45Q537H7 98 aa1.09□□□□□ -2.23
VPS50-214ENST00000477935 DMAC1Q96GE9 116 aa1.08□□□□□ -2.24
VPS50-214ENST00000477935 SPCS1Q9Y6A9 102 aa1.08□□□□□ -2.24
VPS50-214ENST00000477935 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
VPS50-214ENST00000477935 H3BT86 120 aa1.05□□□□□ -2.24
VPS50-214ENST00000477935 TAX1BP3O14907 124 aa1.04□□□□□ -2.24
VPS50-214ENST00000477935 TMEM258P61165 79 aa1.04□□□□□ -2.24
VPS50-214ENST00000477935 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
VPS50-214ENST00000477935 S100A1P23297 94 aa1.03□□□□□ -2.24
VPS50-214ENST00000477935 SCGB1A1P11684 91 aa1.02□□□□□ -2.25
VPS50-214ENST00000477935 ACYP2P14621 99 aa1.02□□□□□ -2.25
VPS50-214ENST00000477935 KTN1-AS1Q86SY8 53 aa1.02□□□□□ -2.25
VPS50-214ENST00000477935 S100A6P06703 90 aa1.01□□□□□ -2.25
VPS50-214ENST00000477935 CHKB-CPT1BH3BT56 60 aa0.98□□□□□ -2.25
VPS50-214ENST00000477935 UQCR10Q9UDW1 63 aa0.97□□□□□ -2.25
VPS50-214ENST00000477935 Q1T7F1 81 aa0.96□□□□□ -2.26
VPS50-214ENST00000477935 M0R143 59 aa0.94□□□□□ -2.26
VPS50-214ENST00000477935 SPATA8Q6RVD6 105 aa0.94□□□□□ -2.26
VPS50-214ENST00000477935 SERP1Q9Y6X1 66 aa0.93□□□□□ -2.26
VPS50-214ENST00000477935 HIST1H4AP62805 103 aaKnown RBP0.92□□□□□ -2.26
VPS50-214ENST00000477935 ATP5EP2Q5VTU8 51 aa0.9□□□□□ -2.27
VPS50-214ENST00000477935 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
VPS50-214ENST00000477935 PYY3Q5JQD4 70 aa0.85□□□□□ -2.27
VPS50-214ENST00000477935 H7BZZ5 65 aa0.84□□□□□ -2.27
VPS50-214ENST00000477935 SERP2Q8N6R1 65 aa0.82□□□□□ -2.28
VPS50-214ENST00000477935 LINC00643Q86TS7 51 aa0.78□□□□□ -2.28
VPS50-214ENST00000477935 F8W1H4 67 aa0.77□□□□□ -2.29
VPS50-214ENST00000477935 PMAIP1Q13794 54 aa0.77□□□□□ -2.29
VPS50-214ENST00000477935 ETDBQ3ZM63 59 aa0.77□□□□□ -2.29
VPS50-214ENST00000477935 PRR15LQ9BU68 103 aa0.75□□□□□ -2.29
VPS50-214ENST00000477935 A0A1B0GU69 56 aa0.74□□□□□ -2.29
VPS50-214ENST00000477935 RPS28P62857 69 aaKnown RBP0.71□□□□□ -2.3
VPS50-214ENST00000477935 GTF2H5Q6ZYL4 71 aa0.71□□□□□ -2.3
VPS50-214ENST00000477935 SMIM20Q8N5G0 67 aa0.71□□□□□ -2.3
VPS50-214ENST00000477935 SNURFQ9Y675 71 aa0.71□□□□□ -2.3
VPS50-214ENST00000477935 COL5A1-AS1Q5SY13 56 aa0.65□□□□□ -2.31
VPS50-214ENST00000477935 UQCR11O14957 56 aa0.6□□□□□ -2.31
VPS50-214ENST00000477935 SMIM6P0DI80 62 aa0.6□□□□□ -2.31
VPS50-214ENST00000477935 CDC42SE1Q9NRR8 79 aa0.57□□□□□ -2.32
VPS50-214ENST00000477935 INE1O15225 51 aa0.55□□□□□ -2.32
VPS50-214ENST00000477935 J3QR89 54 aa0.53□□□□□ -2.32
VPS50-214ENST00000477935 MIR22HGQ0VDD5 57 aa0.53□□□□□ -2.32
VPS50-214ENST00000477935 LINC01558Q9Y6Z2 57 aa0.51□□□□□ -2.33
VPS50-214ENST00000477935 ROMO1P60602 79 aa0.49□□□□□ -2.33
VPS50-214ENST00000477935 COX7CP15954 63 aa0.39□□□□□ -2.35
VPS50-214ENST00000477935 ATP5EP56381 51 aaPredicted RBP0.34□□□□□ -2.36
VPS50-214ENST00000477935 A0A1B0GV90 55 aa0.31□□□□□ -2.36
VPS50-214ENST00000477935 LOC105371267A0A1B0GV96 52 aa0.31□□□□□ -2.36
VPS50-214ENST00000477935 K7ERU9 68 aa0.31□□□□□ -2.36
VPS50-214ENST00000477935 PRM1P04553 51 aa0.19□□□□□ -2.38
VPS50-214ENST00000477935 BRK1Q8WUW1 75 aa0.16□□□□□ -2.38
VPS50-214ENST00000477935 CCDC179H3BU77 68 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 141.1 ms