RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 UQCR11O14957 56 aa5.16□□□□□ -1.58
SOX2-OT-208ENST00000477928 MT1EP04732 61 aa5.15□□□□□ -1.59
SOX2-OT-208ENST00000477928 TNP1P09430 55 aa5.12□□□□□ -1.59
SOX2-OT-208ENST00000477928 V9GYY9 64 aa5.1□□□□□ -1.59
SOX2-OT-208ENST00000477928 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
SOX2-OT-208ENST00000477928 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
SOX2-OT-208ENST00000477928 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
SOX2-OT-208ENST00000477928 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
SOX2-OT-208ENST00000477928 MT1GP13640 62 aa5.01□□□□□ -1.61
SOX2-OT-208ENST00000477928 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
SOX2-OT-208ENST00000477928 Q1T7F1 81 aa5.01□□□□□ -1.61
SOX2-OT-208ENST00000477928 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
SOX2-OT-208ENST00000477928 K7ERS5 55 aa4.98□□□□□ -1.61
SOX2-OT-208ENST00000477928 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
SOX2-OT-208ENST00000477928 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
SOX2-OT-208ENST00000477928 MT1LQ93083 61 aa4.92□□□□□ -1.62
SOX2-OT-208ENST00000477928 PSPHP1O15172 72 aa4.9□□□□□ -1.63
SOX2-OT-208ENST00000477928 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
SOX2-OT-208ENST00000477928 MT1MQ8N339 61 aa4.9□□□□□ -1.63
SOX2-OT-208ENST00000477928 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
SOX2-OT-208ENST00000477928 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-208ENST00000477928 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-208ENST00000477928 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
SOX2-OT-208ENST00000477928 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
SOX2-OT-208ENST00000477928 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
SOX2-OT-208ENST00000477928 A6NED7 52 aa4.79□□□□□ -1.64
SOX2-OT-208ENST00000477928 PCP4P48539 62 aa4.75□□□□□ -1.65
SOX2-OT-208ENST00000477928 MT4P47944 62 aa4.74□□□□□ -1.65
SOX2-OT-208ENST00000477928 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
SOX2-OT-208ENST00000477928 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
SOX2-OT-208ENST00000477928 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
SOX2-OT-208ENST00000477928 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
SOX2-OT-208ENST00000477928 ROMO1P60602 79 aa4.6□□□□□ -1.67
SOX2-OT-208ENST00000477928 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
SOX2-OT-208ENST00000477928 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
SOX2-OT-208ENST00000477928 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
SOX2-OT-208ENST00000477928 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
SOX2-OT-208ENST00000477928 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
SOX2-OT-208ENST00000477928 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
SOX2-OT-208ENST00000477928 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
SOX2-OT-208ENST00000477928 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SOX2-OT-208ENST00000477928 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
SOX2-OT-208ENST00000477928 MT1AP04731 61 aa4.21□□□□□ -1.74
SOX2-OT-208ENST00000477928 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SOX2-OT-208ENST00000477928 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
SOX2-OT-208ENST00000477928 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SOX2-OT-208ENST00000477928 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
SOX2-OT-208ENST00000477928 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
SOX2-OT-208ENST00000477928 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
SOX2-OT-208ENST00000477928 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
SOX2-OT-208ENST00000477928 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
SOX2-OT-208ENST00000477928 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
SOX2-OT-208ENST00000477928 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
SOX2-OT-208ENST00000477928 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SOX2-OT-208ENST00000477928 MT3P25713 68 aa3.87□□□□□ -1.79
SOX2-OT-208ENST00000477928 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
SOX2-OT-208ENST00000477928 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
SOX2-OT-208ENST00000477928 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
SOX2-OT-208ENST00000477928 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
SOX2-OT-208ENST00000477928 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
SOX2-OT-208ENST00000477928 SVIPQ8NHG7 77 aa3.61□□□□□ -1.83
SOX2-OT-208ENST00000477928 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
SOX2-OT-208ENST00000477928 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SOX2-OT-208ENST00000477928 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
SOX2-OT-208ENST00000477928 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SOX2-OT-208ENST00000477928 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SOX2-OT-208ENST00000477928 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
SOX2-OT-208ENST00000477928 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SOX2-OT-208ENST00000477928 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SOX2-OT-208ENST00000477928 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
SOX2-OT-208ENST00000477928 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SOX2-OT-208ENST00000477928 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SOX2-OT-208ENST00000477928 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SOX2-OT-208ENST00000477928 PRM1P04553 51 aa2.31□□□□□ -2.04
SOX2-OT-208ENST00000477928 INE1O15225 51 aa2.19□□□□□ -2.06
SOX2-OT-208ENST00000477928 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SOX2-OT-208ENST00000477928 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 44.4 ms