RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
PRKCD-204ENST00000477794 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
PRKCD-204ENST00000477794 K7ERS5 55 aa6.85□□□□□ -1.31
PRKCD-204ENST00000477794 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
PRKCD-204ENST00000477794 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
PRKCD-204ENST00000477794 MT1GP13640 62 aa6.82□□□□□ -1.32
PRKCD-204ENST00000477794 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
PRKCD-204ENST00000477794 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
PRKCD-204ENST00000477794 MT4P47944 62 aa6.77□□□□□ -1.33
PRKCD-204ENST00000477794 AHNAK2Q8IVF2 5795 aa6.73□□□□□ -1.33
PRKCD-204ENST00000477794 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
PRKCD-204ENST00000477794 MT1MQ8N339 61 aa6.64□□□□□ -1.35
PRKCD-204ENST00000477794 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
PRKCD-204ENST00000477794 MT1LQ93083 61 aa6.57□□□□□ -1.36
PRKCD-204ENST00000477794 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
PRKCD-204ENST00000477794 PRO0628Q9UI54 55 aa6.56□□□□□ -1.36
PRKCD-204ENST00000477794 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
PRKCD-204ENST00000477794 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
PRKCD-204ENST00000477794 ROMO1P60602 79 aa6.44□□□□□ -1.38
PRKCD-204ENST00000477794 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
PRKCD-204ENST00000477794 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
PRKCD-204ENST00000477794 KRTAP5-7Q6L8G8 165 aa6.41□□□□□ -1.38
PRKCD-204ENST00000477794 TNP1P09430 55 aa6.38□□□□□ -1.39
PRKCD-204ENST00000477794 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
PRKCD-204ENST00000477794 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
PRKCD-204ENST00000477794 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
PRKCD-204ENST00000477794 KRTAP20-2Q3LI61 65 aa6.23□□□□□ -1.41
PRKCD-204ENST00000477794 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
PRKCD-204ENST00000477794 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
PRKCD-204ENST00000477794 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
PRKCD-204ENST00000477794 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
PRKCD-204ENST00000477794 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
PRKCD-204ENST00000477794 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
PRKCD-204ENST00000477794 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
PRKCD-204ENST00000477794 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
PRKCD-204ENST00000477794 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
PRKCD-204ENST00000477794 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
PRKCD-204ENST00000477794 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
PRKCD-204ENST00000477794 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
PRKCD-204ENST00000477794 SVIPQ8NHG7 77 aa5.78□□□□□ -1.48
PRKCD-204ENST00000477794 AHNAKQ09666 5890 aaKnown RBP5.77□□□□□ -1.49
PRKCD-204ENST00000477794 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
PRKCD-204ENST00000477794 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
PRKCD-204ENST00000477794 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
PRKCD-204ENST00000477794 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
PRKCD-204ENST00000477794 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
PRKCD-204ENST00000477794 MT1AP04731 61 aa5.61□□□□□ -1.51
PRKCD-204ENST00000477794 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
PRKCD-204ENST00000477794 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
PRKCD-204ENST00000477794 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
PRKCD-204ENST00000477794 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
PRKCD-204ENST00000477794 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
PRKCD-204ENST00000477794 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
PRKCD-204ENST00000477794 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
PRKCD-204ENST00000477794 MT3P25713 68 aa5.2□□□□□ -1.58
PRKCD-204ENST00000477794 KRTAP5-1Q6L8H4 278 aa5.14□□□□□ -1.59
PRKCD-204ENST00000477794 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
PRKCD-204ENST00000477794 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
PRKCD-204ENST00000477794 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
PRKCD-204ENST00000477794 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
PRKCD-204ENST00000477794 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
PRKCD-204ENST00000477794 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
PRKCD-204ENST00000477794 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
PRKCD-204ENST00000477794 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
PRKCD-204ENST00000477794 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
PRKCD-204ENST00000477794 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
PRKCD-204ENST00000477794 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
PRKCD-204ENST00000477794 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
PRKCD-204ENST00000477794 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
PRKCD-204ENST00000477794 INE1O15225 51 aa3.94□□□□□ -1.78
PRKCD-204ENST00000477794 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
PRKCD-204ENST00000477794 H3BS24 57 aa3.69□□□□□ -1.82
PRKCD-204ENST00000477794 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
PRKCD-204ENST00000477794 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
PRKCD-204ENST00000477794 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PRKCD-204ENST00000477794 PRM1P04553 51 aa3.3□□□□□ -1.88
PRKCD-204ENST00000477794 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
PRKCD-204ENST00000477794 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms